Top 10 genes with highest correlation to Rv3256c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0813c/- | (cc=0.5325) | info on Rv0813c/- |
| Rv2609c/- | (cc=0.5255) | info on Rv2609c/- |
| Rv0806c/cpsY | (cc=0.4758) | info on Rv0806c/cpsY |
| Rv1957/- | (cc=0.4614) | info on Rv1957/- |
| Rv2404c/lepA | (cc=0.4613) | info on Rv2404c/lepA |
| Rv3312A/- | (cc=0.4528) | info on Rv3312A/- |
| Rv3920c/- | (cc=0.4373) | info on Rv3920c/- |
| Rv0092/ctpA | (cc=0.4189) | info on Rv0092/ctpA |
| Rv1407/fmu | (cc=0.4175) | info on Rv1407/fmu |
| Rv1330c/pncB1 | (cc=0.417) | info on Rv1330c/pncB1 |
Correlation of Rv3256c/- with Rv1330c/pncB1
Normalized LFCs for Rv3256c/-:
(description and provenance of datasets)
| Rv3256c/- | Rv1330c/pncB1 | |
| Fe_supp_jason_reseq | -0.688 | 0.077 |
| low_pH_jason_reseq | -0.338 | -0.279 |
| NO_jason_reseq | 0.0 | -0.99 |
| B6_jason_reseq | -0.071 | -0.348 |
| MHCII_jason_reseq | 0.977 | 0.768 |
| Isoniazid02 | -1.73 | 0.595 |
| Rifampicin4 | 1.562 | 0.523 |
| Ethambutol3 | -0.23 | 0.197 |
| Meropenem3 | -0.612 | 0.266 |
| Vancomycin16 | -0.207 | 0.687 |
| Rv2680_day32 | -2.899 | -0.105 |
| H37Rv_KO_MarP | -0.291 | -0.278 |
| hypoxia_3wks | -1.782 | 0.283 |
| hypoxia_6wks | -2.518 | -0.177 |
| glycerol | 2.907 | 0.664 |
| cholesterol | -0.055 | 0.194 |
| AJ | -1.477 | 0.412 |
| Bibs02 | 0.42 | 1.139 |
| Bibs02c | 0.418 | 0.937 |
| BL6 | -1.306 | -0.854 |
| BL6a | 0.65 | 0.123 |
| BXD01 | -1.178 | -0.36 |
| BXD010 | -0.816 | 0.288 |
| BXD011 | -0.9 | -0.134 |
| BXD03 | -2.202 | -0.242 |
| BXD04 | -1.725 | -0.121 |
| BXD05 | -1.701 | -0.141 |
| BXD06 | -1.393 | -0.109 |
| BXD07 | -1.59 | 0.455 |
| BXD08 | -1.456 | -0.183 |
| BXD09 | -1.866 | -0.402 |
| CAST | -0.679 | -0.394 |
| CCcont | -0.514 | -0.319 |
| DS01 | -1.668 | -0.212 |
| DS02 | -1.174 | -1.454 |
| DS04 | 1.238 | 0.85 |
| DS0c | -0.343 | 0.77 |
| GP01 | -1.134 | 0.132 |
| GP02 | -1.43 | 0.588 |
| GP0c | -0.205 | 0.081 |
| NOD | -2.031 | -1.298 |
| NZO | -1.636 | -0.072 |
| PWK | -1.458 | -0.756 |
| H37Rv_KO_CtpC | -0.877 | 0.08 |
| H37Rv_KO_CtpD | -1.386 | -0.387 |
| H37Rv_KO_Rv1272 | -0.946 | 0.663 |
| H37Rv_KO_SugABC | 1.043 | 0.629 |
| H37Rv_KO_MbtN | -0.141 | 0.662 |
| Trans05 | 0.0 | 0.484 |
| macrophage_unactivated | 0.338 | -0.966 |
| IL1 | 1.391 | -0.104 |
| Rapamycin | 0.485 | -0.663 |
| Tcell | 0.978 | 2.177 |
| GMCSF | -0.813 | -0.57 |
| IFNab | -0.931 | 0.0 |
| IFNg | 1.849 | -0.556 |
| IFNg_GMCSF1 | 0.647 | -0.456 |
| Rv1432_day32 | -0.727 | 0.545 |
| Rv1565c_day32 | -4.854 | -1.706 |
| secA2_input | -0.712 | 0.254 |
| delta_Rv3594 | 2.47 | 0.701 |
| delta_Rv3717 | 3.651 | 0.856 |
| delta_Rv3811 | 2.668 | 0.497 |
| delta_Rv0954 | 1.009 | -0.208 |
| PonA1 | -0.223 | 0.118 |
| EccD1_KO | -1.365 | -0.424 |
| EspI_KO | -0.856 | -0.088 |
| PE35_KO | -0.957 | 0.09 |
| PPE68_KO | -2.921 | -0.202 |
| glycerol2 | -0.595 | -0.369 |
| lignocerate | -0.024 | -0.742 |
| oleate | -2.393 | 0.688 |
| phosphatidylcholine | -0.69 | 0.13 |
| acetate | 0.324 | 0.324 |
| glucAc | 0.681 | -0.033 |
| Rv0950ko | 1.182 | 0.226 |
| Rv1096ko | 0.63 | 0.38 |
| Rv3684ko | -0.802 | 0.544 |
| delta_otsA_trehalose | -0.965 | 0.007 |