Top 10 genes with highest correlation to Rv3256c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0813c/- | (cc=0.5325) | info on Rv0813c/- |
| Rv2609c/- | (cc=0.5255) | info on Rv2609c/- |
| Rv0806c/cpsY | (cc=0.4758) | info on Rv0806c/cpsY |
| Rv1957/- | (cc=0.4614) | info on Rv1957/- |
| Rv2404c/lepA | (cc=0.4613) | info on Rv2404c/lepA |
| Rv3312A/- | (cc=0.4528) | info on Rv3312A/- |
| Rv3920c/- | (cc=0.4373) | info on Rv3920c/- |
| Rv0092/ctpA | (cc=0.4189) | info on Rv0092/ctpA |
| Rv1407/fmu | (cc=0.4175) | info on Rv1407/fmu |
| Rv1330c/pncB1 | (cc=0.417) | info on Rv1330c/pncB1 |
Correlation of Rv3256c/- with Rv2404c/lepA
Normalized LFCs for Rv3256c/-:
(description and provenance of datasets)
| Rv3256c/- | Rv2404c/lepA | |
| Fe_supp_jason_reseq | -0.688 | 0.598 |
| low_pH_jason_reseq | -0.338 | -1.467 |
| NO_jason_reseq | 0.0 | 2.108 |
| B6_jason_reseq | -0.071 | 0.881 |
| MHCII_jason_reseq | 0.977 | -0.098 |
| Isoniazid02 | -1.73 | 5.905 |
| Rifampicin4 | 1.562 | 1.597 |
| Ethambutol3 | -0.23 | 1.79 |
| Meropenem3 | -0.612 | 0.264 |
| Vancomycin16 | -0.207 | 0.846 |
| Rv2680_day32 | -2.899 | -0.613 |
| H37Rv_KO_MarP | -0.291 | 1.555 |
| hypoxia_3wks | -1.782 | -3.274 |
| hypoxia_6wks | -2.518 | -3.802 |
| glycerol | 2.907 | 1.044 |
| cholesterol | -0.055 | -0.171 |
| AJ | -1.477 | -0.41 |
| Bibs02 | 0.42 | -1.46 |
| Bibs02c | 0.418 | -0.94 |
| BL6 | -1.306 | -1.237 |
| BL6a | 0.65 | 0.098 |
| BXD01 | -1.178 | -1.128 |
| BXD010 | -0.816 | 0.312 |
| BXD011 | -0.9 | 0.269 |
| BXD03 | -2.202 | 0.192 |
| BXD04 | -1.725 | -0.987 |
| BXD05 | -1.701 | 0.654 |
| BXD06 | -1.393 | 1.065 |
| BXD07 | -1.59 | 0.068 |
| BXD08 | -1.456 | 0.04 |
| BXD09 | -1.866 | -0.265 |
| CAST | -0.679 | -1.146 |
| CCcont | -0.514 | 0.0 |
| DS01 | -1.668 | -1.461 |
| DS02 | -1.174 | -2.658 |
| DS04 | 1.238 | -0.698 |
| DS0c | -0.343 | -1.422 |
| GP01 | -1.134 | -0.384 |
| GP02 | -1.43 | -0.867 |
| GP0c | -0.205 | -0.506 |
| NOD | -2.031 | -0.023 |
| NZO | -1.636 | -0.928 |
| PWK | -1.458 | -1.324 |
| H37Rv_KO_CtpC | -0.877 | -1.832 |
| H37Rv_KO_CtpD | -1.386 | -0.957 |
| H37Rv_KO_Rv1272 | -0.946 | -0.3 |
| H37Rv_KO_SugABC | 1.043 | -0.073 |
| H37Rv_KO_MbtN | -0.141 | 0.832 |
| Trans05 | 0.0 | -1.161 |
| macrophage_unactivated | 0.338 | 0.451 |
| IL1 | 1.391 | 0.249 |
| Rapamycin | 0.485 | 0.319 |
| Tcell | 0.978 | 0.068 |
| GMCSF | -0.813 | 0.816 |
| IFNab | -0.931 | -0.408 |
| IFNg | 1.849 | 0.224 |
| IFNg_GMCSF1 | 0.647 | 0.327 |
| Rv1432_day32 | -0.727 | 0.824 |
| Rv1565c_day32 | -4.854 | -2.443 |
| secA2_input | -0.712 | -0.542 |
| delta_Rv3594 | 2.47 | 3.552 |
| delta_Rv3717 | 3.651 | 4.823 |
| delta_Rv3811 | 2.668 | 2.528 |
| delta_Rv0954 | 1.009 | 3.693 |
| PonA1 | -0.223 | 0.0 |
| EccD1_KO | -1.365 | 0.056 |
| EspI_KO | -0.856 | 0.816 |
| PE35_KO | -0.957 | 0.298 |
| PPE68_KO | -2.921 | 0.915 |
| glycerol2 | -0.595 | -0.094 |
| lignocerate | -0.024 | -1.316 |
| oleate | -2.393 | -0.703 |
| phosphatidylcholine | -0.69 | -1.192 |
| acetate | 0.324 | -0.111 |
| glucAc | 0.681 | -0.084 |
| Rv0950ko | 1.182 | 0.651 |
| Rv1096ko | 0.63 | -0.19 |
| Rv3684ko | -0.802 | 1.002 |
| delta_otsA_trehalose | -0.965 | -0.866 |