Top 10 genes with highest correlation to Rv3256c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0813c/- | (cc=0.5325) | info on Rv0813c/- |
| Rv2609c/- | (cc=0.5255) | info on Rv2609c/- |
| Rv0806c/cpsY | (cc=0.4758) | info on Rv0806c/cpsY |
| Rv1957/- | (cc=0.4614) | info on Rv1957/- |
| Rv2404c/lepA | (cc=0.4613) | info on Rv2404c/lepA |
| Rv3312A/- | (cc=0.4528) | info on Rv3312A/- |
| Rv3920c/- | (cc=0.4373) | info on Rv3920c/- |
| Rv0092/ctpA | (cc=0.4189) | info on Rv0092/ctpA |
| Rv1407/fmu | (cc=0.4175) | info on Rv1407/fmu |
| Rv1330c/pncB1 | (cc=0.417) | info on Rv1330c/pncB1 |
Correlation of Rv3256c/- with Rv1407/fmu
Normalized LFCs for Rv3256c/-:
(description and provenance of datasets)
| Rv3256c/- | Rv1407/fmu | |
| Fe_supp_jason_reseq | -0.688 | -0.467 |
| low_pH_jason_reseq | -0.338 | -2.391 |
| NO_jason_reseq | 0.0 | 0.053 |
| B6_jason_reseq | -0.071 | -1.467 |
| MHCII_jason_reseq | 0.977 | -0.217 |
| Isoniazid02 | -1.73 | 1.15 |
| Rifampicin4 | 1.562 | 0.866 |
| Ethambutol3 | -0.23 | -0.123 |
| Meropenem3 | -0.612 | 0.089 |
| Vancomycin16 | -0.207 | 0.249 |
| Rv2680_day32 | -2.899 | -0.573 |
| H37Rv_KO_MarP | -0.291 | -0.072 |
| hypoxia_3wks | -1.782 | -0.159 |
| hypoxia_6wks | -2.518 | -0.683 |
| glycerol | 2.907 | 2.042 |
| cholesterol | -0.055 | 1.49 |
| AJ | -1.477 | -0.514 |
| Bibs02 | 0.42 | -0.24 |
| Bibs02c | 0.418 | 0.929 |
| BL6 | -1.306 | -0.208 |
| BL6a | 0.65 | 0.23 |
| BXD01 | -1.178 | -0.419 |
| BXD010 | -0.816 | -0.677 |
| BXD011 | -0.9 | -0.962 |
| BXD03 | -2.202 | -0.615 |
| BXD04 | -1.725 | -0.787 |
| BXD05 | -1.701 | -0.934 |
| BXD06 | -1.393 | -0.607 |
| BXD07 | -1.59 | -1.233 |
| BXD08 | -1.456 | -0.246 |
| BXD09 | -1.866 | -0.975 |
| CAST | -0.679 | -0.646 |
| CCcont | -0.514 | 0.214 |
| DS01 | -1.668 | 0.036 |
| DS02 | -1.174 | -0.173 |
| DS04 | 1.238 | 0.698 |
| DS0c | -0.343 | -1.571 |
| GP01 | -1.134 | 0.902 |
| GP02 | -1.43 | -0.34 |
| GP0c | -0.205 | -0.474 |
| NOD | -2.031 | -1.022 |
| NZO | -1.636 | -0.331 |
| PWK | -1.458 | -0.435 |
| H37Rv_KO_CtpC | -0.877 | -0.859 |
| H37Rv_KO_CtpD | -1.386 | -0.407 |
| H37Rv_KO_Rv1272 | -0.946 | 0.346 |
| H37Rv_KO_SugABC | 1.043 | 0.42 |
| H37Rv_KO_MbtN | -0.141 | 0.148 |
| Trans05 | 0.0 | 0.717 |
| macrophage_unactivated | 0.338 | -0.451 |
| IL1 | 1.391 | -0.7 |
| Rapamycin | 0.485 | 0.476 |
| Tcell | 0.978 | -0.274 |
| GMCSF | -0.813 | 0.071 |
| IFNab | -0.931 | -0.166 |
| IFNg | 1.849 | -1.184 |
| IFNg_GMCSF1 | 0.647 | -0.742 |
| Rv1432_day32 | -0.727 | 0.13 |
| Rv1565c_day32 | -4.854 | -0.063 |
| secA2_input | -0.712 | -0.142 |
| delta_Rv3594 | 2.47 | 0.951 |
| delta_Rv3717 | 3.651 | 1.682 |
| delta_Rv3811 | 2.668 | 0.546 |
| delta_Rv0954 | 1.009 | 0.788 |
| PonA1 | -0.223 | -0.631 |
| EccD1_KO | -1.365 | 0.23 |
| EspI_KO | -0.856 | -0.667 |
| PE35_KO | -0.957 | 0.904 |
| PPE68_KO | -2.921 | -0.141 |
| glycerol2 | -0.595 | -0.832 |
| lignocerate | -0.024 | -0.57 |
| oleate | -2.393 | -0.291 |
| phosphatidylcholine | -0.69 | -0.287 |
| acetate | 0.324 | 0.057 |
| glucAc | 0.681 | -0.112 |
| Rv0950ko | 1.182 | 1.089 |
| Rv1096ko | 0.63 | 1.526 |
| Rv3684ko | -0.802 | 0.603 |
| delta_otsA_trehalose | -0.965 | -1.541 |