Top 10 genes with highest correlation to Rv3233c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2489c/- | (cc=0.6032) | info on Rv2489c/- |
| Rv2659c/- | (cc=0.5755) | info on Rv2659c/- |
| Rv3566c/nat | (cc=0.5612) | info on Rv3566c/nat |
| Rv1148c/- | (cc=0.5556) | info on Rv1148c/- |
| Rv0968/- | (cc=0.5528) | info on Rv0968/- |
| Rv2724c/fadE20 | (cc=0.5394) | info on Rv2724c/fadE20 |
| Rv3191c/- | (cc=0.5308) | info on Rv3191c/- |
| Rv1101c/- | (cc=0.5139) | info on Rv1101c/- |
| Rv0213c/- | (cc=0.494) | info on Rv0213c/- |
| Rv0343/iniC | (cc=0.4853) | info on Rv0343/iniC |
Correlation of Rv3233c/- with Rv2659c/-
Normalized LFCs for Rv3233c/-:
(description and provenance of datasets)
| Rv3233c/- | Rv2659c/- | |
| Fe_supp_jason_reseq | -0.284 | 0.035 |
| low_pH_jason_reseq | -0.992 | -0.545 |
| NO_jason_reseq | 0.179 | -0.029 |
| B6_jason_reseq | 0.054 | -0.051 |
| MHCII_jason_reseq | 0.65 | 0.522 |
| Isoniazid02 | -1.117 | -0.01 |
| Rifampicin4 | 0.236 | -0.227 |
| Ethambutol3 | -1.294 | -0.091 |
| Meropenem3 | -1.702 | -1.854 |
| Vancomycin16 | -0.947 | -1.393 |
| Rv2680_day32 | 0.518 | 0.397 |
| H37Rv_KO_MarP | 0.382 | 0.277 |
| hypoxia_3wks | -0.247 | -0.163 |
| hypoxia_6wks | -0.578 | -0.163 |
| glycerol | -0.995 | -0.268 |
| cholesterol | 0.292 | -0.358 |
| AJ | -0.034 | 0.627 |
| Bibs02 | -0.048 | 0.615 |
| Bibs02c | 0.382 | -0.023 |
| BL6 | 0.252 | -0.11 |
| BL6a | -0.172 | 0.022 |
| BXD01 | -0.537 | -0.005 |
| BXD010 | -0.443 | -0.093 |
| BXD011 | -0.305 | 0.129 |
| BXD03 | -0.016 | 0.005 |
| BXD04 | -0.282 | 0.088 |
| BXD05 | 0.252 | -0.265 |
| BXD06 | -0.5 | 0.0 |
| BXD07 | -0.267 | 0.238 |
| BXD08 | -0.323 | 0.366 |
| BXD09 | -0.131 | -0.186 |
| CAST | 0.744 | 0.179 |
| CCcont | -0.622 | -0.454 |
| DS01 | 0.681 | 0.421 |
| DS02 | 0.354 | 0.326 |
| DS04 | 0.06 | 0.37 |
| DS0c | 0.327 | 0.393 |
| GP01 | 0.382 | 0.747 |
| GP02 | -0.673 | -0.669 |
| GP0c | -0.455 | -0.12 |
| NOD | 1.451 | 1.3 |
| NZO | 0.887 | 0.452 |
| PWK | -0.064 | 0.81 |
| H37Rv_KO_CtpC | -0.005 | 0.175 |
| H37Rv_KO_CtpD | 0.477 | -0.41 |
| H37Rv_KO_Rv1272 | -0.004 | 0.529 |
| H37Rv_KO_SugABC | 0.588 | 0.774 |
| H37Rv_KO_MbtN | 0.003 | -0.108 |
| Trans05 | -0.164 | -0.317 |
| macrophage_unactivated | -0.069 | -0.325 |
| IL1 | -0.632 | -0.359 |
| Rapamycin | -0.371 | -0.279 |
| Tcell | -0.414 | -0.072 |
| GMCSF | -0.029 | 0.087 |
| IFNab | 0.115 | -0.366 |
| IFNg | -0.307 | 0.406 |
| IFNg_GMCSF1 | 0.962 | 0.05 |
| Rv1432_day32 | 0.098 | 0.708 |
| Rv1565c_day32 | 0.415 | 0.706 |
| secA2_input | -0.704 | 0.146 |
| delta_Rv3594 | -0.072 | 0.56 |
| delta_Rv3717 | -0.185 | 0.028 |
| delta_Rv3811 | 0.39 | 0.561 |
| delta_Rv0954 | -0.146 | 0.267 |
| PonA1 | 0.898 | -0.364 |
| EccD1_KO | 0.0 | 0.408 |
| EspI_KO | 0.031 | 0.322 |
| PE35_KO | -0.146 | 0.265 |
| PPE68_KO | -0.106 | 0.499 |
| glycerol2 | -0.377 | -0.076 |
| lignocerate | -0.476 | -0.211 |
| oleate | 0.043 | 0.546 |
| phosphatidylcholine | -0.52 | 0.412 |
| acetate | -0.986 | -0.687 |
| glucAc | -0.808 | -0.896 |
| Rv0950ko | 0.482 | 0.081 |
| Rv1096ko | 0.591 | 0.211 |
| Rv3684ko | 0.553 | -0.183 |
| delta_otsA_trehalose | -0.19 | -0.7 |