Top 10 genes with highest correlation to Rv3233c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2489c/- | (cc=0.6032) | info on Rv2489c/- |
| Rv2659c/- | (cc=0.5755) | info on Rv2659c/- |
| Rv3566c/nat | (cc=0.5612) | info on Rv3566c/nat |
| Rv1148c/- | (cc=0.5556) | info on Rv1148c/- |
| Rv0968/- | (cc=0.5528) | info on Rv0968/- |
| Rv2724c/fadE20 | (cc=0.5394) | info on Rv2724c/fadE20 |
| Rv3191c/- | (cc=0.5308) | info on Rv3191c/- |
| Rv1101c/- | (cc=0.5139) | info on Rv1101c/- |
| Rv0213c/- | (cc=0.494) | info on Rv0213c/- |
| Rv0343/iniC | (cc=0.4853) | info on Rv0343/iniC |
Correlation of Rv3233c/- with Rv1148c/-
Normalized LFCs for Rv3233c/-:
(description and provenance of datasets)
| Rv3233c/- | Rv1148c/- | |
| Fe_supp_jason_reseq | -0.284 | -0.382 |
| low_pH_jason_reseq | -0.992 | 0.241 |
| NO_jason_reseq | 0.179 | 0.302 |
| B6_jason_reseq | 0.054 | 0.404 |
| MHCII_jason_reseq | 0.65 | 0.684 |
| Isoniazid02 | -1.117 | -1.86 |
| Rifampicin4 | 0.236 | -0.422 |
| Ethambutol3 | -1.294 | -1.462 |
| Meropenem3 | -1.702 | -1.765 |
| Vancomycin16 | -0.947 | -1.321 |
| Rv2680_day32 | 0.518 | 0.029 |
| H37Rv_KO_MarP | 0.382 | 0.357 |
| hypoxia_3wks | -0.247 | 0.04 |
| hypoxia_6wks | -0.578 | 0.061 |
| glycerol | -0.995 | -0.771 |
| cholesterol | 0.292 | -0.533 |
| AJ | -0.034 | 0.751 |
| Bibs02 | -0.048 | -0.142 |
| Bibs02c | 0.382 | 0.409 |
| BL6 | 0.252 | -0.781 |
| BL6a | -0.172 | 0.152 |
| BXD01 | -0.537 | -0.755 |
| BXD010 | -0.443 | -0.426 |
| BXD011 | -0.305 | -0.398 |
| BXD03 | -0.016 | -0.259 |
| BXD04 | -0.282 | -0.537 |
| BXD05 | 0.252 | -0.062 |
| BXD06 | -0.5 | -0.54 |
| BXD07 | -0.267 | -0.611 |
| BXD08 | -0.323 | -0.47 |
| BXD09 | -0.131 | -0.338 |
| CAST | 0.744 | 0.392 |
| CCcont | -0.622 | -1.578 |
| DS01 | 0.681 | 0.046 |
| DS02 | 0.354 | 0.085 |
| DS04 | 0.06 | 0.72 |
| DS0c | 0.327 | 0.256 |
| GP01 | 0.382 | -0.269 |
| GP02 | -0.673 | -0.582 |
| GP0c | -0.455 | -0.645 |
| NOD | 1.451 | -0.225 |
| NZO | 0.887 | 0.526 |
| PWK | -0.064 | 0.342 |
| H37Rv_KO_CtpC | -0.005 | 0.277 |
| H37Rv_KO_CtpD | 0.477 | -0.184 |
| H37Rv_KO_Rv1272 | -0.004 | -0.7 |
| H37Rv_KO_SugABC | 0.588 | -0.22 |
| H37Rv_KO_MbtN | 0.003 | -0.173 |
| Trans05 | -0.164 | -0.159 |
| macrophage_unactivated | -0.069 | -0.748 |
| IL1 | -0.632 | -0.113 |
| Rapamycin | -0.371 | -0.46 |
| Tcell | -0.414 | -0.665 |
| GMCSF | -0.029 | 0.024 |
| IFNab | 0.115 | -0.266 |
| IFNg | -0.307 | 0.126 |
| IFNg_GMCSF1 | 0.962 | 0.116 |
| Rv1432_day32 | 0.098 | 0.164 |
| Rv1565c_day32 | 0.415 | 0.652 |
| secA2_input | -0.704 | 0.177 |
| delta_Rv3594 | -0.072 | 0.601 |
| delta_Rv3717 | -0.185 | 0.563 |
| delta_Rv3811 | 0.39 | 0.552 |
| delta_Rv0954 | -0.146 | 0.762 |
| PonA1 | 0.898 | 0.321 |
| EccD1_KO | 0.0 | 0.576 |
| EspI_KO | 0.031 | 0.975 |
| PE35_KO | -0.146 | 0.28 |
| PPE68_KO | -0.106 | 1.062 |
| glycerol2 | -0.377 | -0.08 |
| lignocerate | -0.476 | -0.348 |
| oleate | 0.043 | 0.213 |
| phosphatidylcholine | -0.52 | 0.108 |
| acetate | -0.986 | -0.52 |
| glucAc | -0.808 | -0.797 |
| Rv0950ko | 0.482 | -0.211 |
| Rv1096ko | 0.591 | 0.446 |
| Rv3684ko | 0.553 | 0.219 |
| delta_otsA_trehalose | -0.19 | 0.487 |