Top 10 genes with highest correlation to Rv3233c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2489c/- | (cc=0.6032) | info on Rv2489c/- |
| Rv2659c/- | (cc=0.5755) | info on Rv2659c/- |
| Rv3566c/nat | (cc=0.5612) | info on Rv3566c/nat |
| Rv1148c/- | (cc=0.5556) | info on Rv1148c/- |
| Rv0968/- | (cc=0.5528) | info on Rv0968/- |
| Rv2724c/fadE20 | (cc=0.5394) | info on Rv2724c/fadE20 |
| Rv3191c/- | (cc=0.5308) | info on Rv3191c/- |
| Rv1101c/- | (cc=0.5139) | info on Rv1101c/- |
| Rv0213c/- | (cc=0.494) | info on Rv0213c/- |
| Rv0343/iniC | (cc=0.4853) | info on Rv0343/iniC |
Correlation of Rv3233c/- with Rv0343/iniC
Normalized LFCs for Rv3233c/-:
(description and provenance of datasets)
| Rv3233c/- | Rv0343/iniC | |
| Fe_supp_jason_reseq | -0.284 | -0.876 |
| low_pH_jason_reseq | -0.992 | 0.04 |
| NO_jason_reseq | 0.179 | 1.239 |
| B6_jason_reseq | 0.054 | -0.246 |
| MHCII_jason_reseq | 0.65 | 0.652 |
| Isoniazid02 | -1.117 | -1.734 |
| Rifampicin4 | 0.236 | 0.609 |
| Ethambutol3 | -1.294 | -2.748 |
| Meropenem3 | -1.702 | -2.168 |
| Vancomycin16 | -0.947 | -0.783 |
| Rv2680_day32 | 0.518 | 0.926 |
| H37Rv_KO_MarP | 0.382 | 1.442 |
| hypoxia_3wks | -0.247 | -0.431 |
| hypoxia_6wks | -0.578 | -0.123 |
| glycerol | -0.995 | 0.635 |
| cholesterol | 0.292 | 0.014 |
| AJ | -0.034 | 0.064 |
| Bibs02 | -0.048 | 0.034 |
| Bibs02c | 0.382 | -0.508 |
| BL6 | 0.252 | -0.024 |
| BL6a | -0.172 | 0.212 |
| BXD01 | -0.537 | 0.128 |
| BXD010 | -0.443 | -0.223 |
| BXD011 | -0.305 | -0.113 |
| BXD03 | -0.016 | -0.593 |
| BXD04 | -0.282 | 0.432 |
| BXD05 | 0.252 | 0.013 |
| BXD06 | -0.5 | -0.202 |
| BXD07 | -0.267 | -0.136 |
| BXD08 | -0.323 | 0.826 |
| BXD09 | -0.131 | 0.984 |
| CAST | 0.744 | 0.38 |
| CCcont | -0.622 | -0.473 |
| DS01 | 0.681 | -0.282 |
| DS02 | 0.354 | 0.158 |
| DS04 | 0.06 | -0.294 |
| DS0c | 0.327 | 0.605 |
| GP01 | 0.382 | 0.08 |
| GP02 | -0.673 | -0.242 |
| GP0c | -0.455 | -0.102 |
| NOD | 1.451 | 0.753 |
| NZO | 0.887 | 0.484 |
| PWK | -0.064 | 0.446 |
| H37Rv_KO_CtpC | -0.005 | -0.473 |
| H37Rv_KO_CtpD | 0.477 | 0.93 |
| H37Rv_KO_Rv1272 | -0.004 | 0.52 |
| H37Rv_KO_SugABC | 0.588 | -0.654 |
| H37Rv_KO_MbtN | 0.003 | -1.606 |
| Trans05 | -0.164 | 1.367 |
| macrophage_unactivated | -0.069 | 0.098 |
| IL1 | -0.632 | 0.0 |
| Rapamycin | -0.371 | -0.976 |
| Tcell | -0.414 | 0.101 |
| GMCSF | -0.029 | -0.737 |
| IFNab | 0.115 | 0.369 |
| IFNg | -0.307 | 0.97 |
| IFNg_GMCSF1 | 0.962 | 1.511 |
| Rv1432_day32 | 0.098 | -0.416 |
| Rv1565c_day32 | 0.415 | 0.719 |
| secA2_input | -0.704 | -0.216 |
| delta_Rv3594 | -0.072 | -0.854 |
| delta_Rv3717 | -0.185 | -1.719 |
| delta_Rv3811 | 0.39 | 0.326 |
| delta_Rv0954 | -0.146 | -0.085 |
| PonA1 | 0.898 | 0.048 |
| EccD1_KO | 0.0 | 0.194 |
| EspI_KO | 0.031 | -0.362 |
| PE35_KO | -0.146 | -0.143 |
| PPE68_KO | -0.106 | -0.579 |
| glycerol2 | -0.377 | 0.104 |
| lignocerate | -0.476 | 0.125 |
| oleate | 0.043 | 0.384 |
| phosphatidylcholine | -0.52 | -0.098 |
| acetate | -0.986 | -0.158 |
| glucAc | -0.808 | -0.267 |
| Rv0950ko | 0.482 | -0.087 |
| Rv1096ko | 0.591 | -0.133 |
| Rv3684ko | 0.553 | 0.0 |
| delta_otsA_trehalose | -0.19 | -1.182 |