Top 10 genes with highest correlation to Rv3230c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3229c/desA3 | (cc=0.6832) | info on Rv3229c/desA3 |
| Rv1085c/- | (cc=0.5478) | info on Rv1085c/- |
| Rv2081c/- | (cc=0.4949) | info on Rv2081c/- |
| Rv1074c/fadA3 | (cc=0.4893) | info on Rv1074c/fadA3 |
| Rv0692/- | (cc=0.4855) | info on Rv0692/- |
| Rv0390/- | (cc=0.4682) | info on Rv0390/- |
| Rv3510c/- | (cc=0.4643) | info on Rv3510c/- |
| Rv1523/- | (cc=0.458) | info on Rv1523/- |
| Rv2360c/- | (cc=0.4568) | info on Rv2360c/- |
| Rv1590/- | (cc=0.4478) | info on Rv1590/- |
Correlation of Rv3230c/- with Rv1590/-
Normalized LFCs for Rv3230c/-:
(description and provenance of datasets)
| Rv3230c/- | Rv1590/- | |
| Fe_supp_jason_reseq | 1.118 | 1.809 |
| low_pH_jason_reseq | -2.28 | -2.058 |
| NO_jason_reseq | -0.845 | -0.391 |
| B6_jason_reseq | 0.018 | -5.114 |
| MHCII_jason_reseq | 0.613 | -4.029 |
| Isoniazid02 | 0.042 | -0.288 |
| Rifampicin4 | 0.658 | -0.273 |
| Ethambutol3 | 0.295 | 0.114 |
| Meropenem3 | -0.351 | 0.156 |
| Vancomycin16 | 0.838 | 0.462 |
| Rv2680_day32 | -0.428 | -4.076 |
| H37Rv_KO_MarP | -1.544 | -0.391 |
| hypoxia_3wks | 1.22 | 0.598 |
| hypoxia_6wks | -0.639 | -0.18 |
| glycerol | -4.991 | -6.0 |
| cholesterol | -2.671 | -4.706 |
| AJ | -0.822 | -6.0 |
| Bibs02 | -2.383 | -5.941 |
| Bibs02c | -2.902 | -6.0 |
| BL6 | -0.393 | -3.094 |
| BL6a | -1.967 | -5.463 |
| BXD01 | -1.526 | -3.774 |
| BXD010 | -0.935 | -4.161 |
| BXD011 | -0.42 | -3.691 |
| BXD03 | -1.709 | -4.393 |
| BXD04 | -1.516 | -4.018 |
| BXD05 | -0.7 | -3.329 |
| BXD06 | -1.326 | -4.337 |
| BXD07 | -1.482 | -4.499 |
| BXD08 | -1.17 | -4.321 |
| BXD09 | -1.416 | -4.566 |
| CAST | -0.911 | -5.586 |
| CCcont | -0.357 | 0.202 |
| DS01 | -2.046 | -6.0 |
| DS02 | -1.465 | -6.0 |
| DS04 | -0.238 | -3.596 |
| DS0c | -1.851 | -6.0 |
| GP01 | -1.483 | -2.937 |
| GP02 | -1.429 | -2.475 |
| GP0c | -1.832 | -1.317 |
| NOD | 0.0 | -4.357 |
| NZO | -0.433 | -6.0 |
| PWK | -0.034 | -5.836 |
| H37Rv_KO_CtpC | -2.325 | -4.101 |
| H37Rv_KO_CtpD | -0.35 | -1.658 |
| H37Rv_KO_Rv1272 | -0.306 | -4.196 |
| H37Rv_KO_SugABC | 0.54 | -1.708 |
| H37Rv_KO_MbtN | 0.386 | 0.152 |
| Trans05 | -1.065 | -3.603 |
| macrophage_unactivated | -0.054 | 0.145 |
| IL1 | 0.3 | -0.442 |
| Rapamycin | -1.587 | 2.243 |
| Tcell | -1.766 | 0.241 |
| GMCSF | -0.541 | 0.723 |
| IFNab | -0.384 | 1.36 |
| IFNg | 0.719 | -0.657 |
| IFNg_GMCSF1 | -0.399 | -2.209 |
| Rv1432_day32 | 0.226 | -6.0 |
| Rv1565c_day32 | -0.297 | -6.0 |
| secA2_input | -0.833 | -0.088 |
| delta_Rv3594 | -0.135 | 1.781 |
| delta_Rv3717 | -0.696 | 1.747 |
| delta_Rv3811 | -0.382 | 0.921 |
| delta_Rv0954 | 0.742 | 0.376 |
| PonA1 | -0.076 | 1.032 |
| EccD1_KO | -0.076 | -1.312 |
| EspI_KO | -0.827 | -0.556 |
| PE35_KO | -1.747 | -0.621 |
| PPE68_KO | -0.442 | -1.145 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | -1.011 | 0.168 |
| oleate | -0.425 | 0.0 |
| phosphatidylcholine | 0.399 | 0.0 |
| acetate | -1.25 | 0.0 |
| glucAc | -1.735 | 1.034 |
| Rv0950ko | -0.401 | -0.651 |
| Rv1096ko | -0.217 | 1.113 |
| Rv3684ko | 0.783 | -0.17 |
| delta_otsA_trehalose | 0.564 | 1.762 |