Top 10 genes with highest correlation to Rv3230c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3229c/desA3 | (cc=0.6832) | info on Rv3229c/desA3 |
| Rv1085c/- | (cc=0.5478) | info on Rv1085c/- |
| Rv2081c/- | (cc=0.4949) | info on Rv2081c/- |
| Rv1074c/fadA3 | (cc=0.4893) | info on Rv1074c/fadA3 |
| Rv0692/- | (cc=0.4855) | info on Rv0692/- |
| Rv0390/- | (cc=0.4682) | info on Rv0390/- |
| Rv3510c/- | (cc=0.4643) | info on Rv3510c/- |
| Rv1523/- | (cc=0.458) | info on Rv1523/- |
| Rv2360c/- | (cc=0.4568) | info on Rv2360c/- |
| Rv1590/- | (cc=0.4478) | info on Rv1590/- |
Correlation of Rv3230c/- with Rv1074c/fadA3
Normalized LFCs for Rv3230c/-:
(description and provenance of datasets)
| Rv3230c/- | Rv1074c/fadA3 | |
| Fe_supp_jason_reseq | 1.118 | 0.156 |
| low_pH_jason_reseq | -2.28 | -1.651 |
| NO_jason_reseq | -0.845 | -1.131 |
| B6_jason_reseq | 0.018 | 0.294 |
| MHCII_jason_reseq | 0.613 | 0.55 |
| Isoniazid02 | 0.042 | 0.787 |
| Rifampicin4 | 0.658 | 0.709 |
| Ethambutol3 | 0.295 | 2.327 |
| Meropenem3 | -0.351 | 0.417 |
| Vancomycin16 | 0.838 | 0.117 |
| Rv2680_day32 | -0.428 | -1.003 |
| H37Rv_KO_MarP | -1.544 | -0.365 |
| hypoxia_3wks | 1.22 | -0.578 |
| hypoxia_6wks | -0.639 | -0.42 |
| glycerol | -4.991 | -0.492 |
| cholesterol | -2.671 | -0.829 |
| AJ | -0.822 | -0.23 |
| Bibs02 | -2.383 | -0.372 |
| Bibs02c | -2.902 | -1.543 |
| BL6 | -0.393 | 0.206 |
| BL6a | -1.967 | -0.709 |
| BXD01 | -1.526 | -0.276 |
| BXD010 | -0.935 | 0.07 |
| BXD011 | -0.42 | -0.377 |
| BXD03 | -1.709 | -0.348 |
| BXD04 | -1.516 | -0.428 |
| BXD05 | -0.7 | -0.118 |
| BXD06 | -1.326 | -0.3 |
| BXD07 | -1.482 | -0.282 |
| BXD08 | -1.17 | -0.629 |
| BXD09 | -1.416 | -0.441 |
| CAST | -0.911 | 0.289 |
| CCcont | -0.357 | -0.023 |
| DS01 | -2.046 | -0.313 |
| DS02 | -1.465 | -0.321 |
| DS04 | -0.238 | -0.021 |
| DS0c | -1.851 | 0.179 |
| GP01 | -1.483 | -1.025 |
| GP02 | -1.429 | -0.154 |
| GP0c | -1.832 | -1.127 |
| NOD | 0.0 | 1.271 |
| NZO | -0.433 | -0.16 |
| PWK | -0.034 | 0.479 |
| H37Rv_KO_CtpC | -2.325 | 0.144 |
| H37Rv_KO_CtpD | -0.35 | -0.442 |
| H37Rv_KO_Rv1272 | -0.306 | 0.994 |
| H37Rv_KO_SugABC | 0.54 | 0.225 |
| H37Rv_KO_MbtN | 0.386 | -0.354 |
| Trans05 | -1.065 | 0.103 |
| macrophage_unactivated | -0.054 | 0.982 |
| IL1 | 0.3 | 0.047 |
| Rapamycin | -1.587 | 0.393 |
| Tcell | -1.766 | 0.0 |
| GMCSF | -0.541 | 0.673 |
| IFNab | -0.384 | 0.284 |
| IFNg | 0.719 | 0.23 |
| IFNg_GMCSF1 | -0.399 | 0.317 |
| Rv1432_day32 | 0.226 | 0.237 |
| Rv1565c_day32 | -0.297 | 0.088 |
| secA2_input | -0.833 | 0.564 |
| delta_Rv3594 | -0.135 | 0.454 |
| delta_Rv3717 | -0.696 | 0.052 |
| delta_Rv3811 | -0.382 | -0.028 |
| delta_Rv0954 | 0.742 | 1.149 |
| PonA1 | -0.076 | 0.083 |
| EccD1_KO | -0.076 | 0.46 |
| EspI_KO | -0.827 | 1.069 |
| PE35_KO | -1.747 | 1.517 |
| PPE68_KO | -0.442 | 1.072 |
| glycerol2 | 0.0 | 1.118 |
| lignocerate | -1.011 | 1.327 |
| oleate | -0.425 | 0.143 |
| phosphatidylcholine | 0.399 | 1.452 |
| acetate | -1.25 | 0.158 |
| glucAc | -1.735 | 0.093 |
| Rv0950ko | -0.401 | 0.582 |
| Rv1096ko | -0.217 | 0.244 |
| Rv3684ko | 0.783 | 0.868 |
| delta_otsA_trehalose | 0.564 | 2.072 |