Top 10 genes with highest correlation to Rv3230c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3229c/desA3 | (cc=0.6832) | info on Rv3229c/desA3 |
| Rv1085c/- | (cc=0.5478) | info on Rv1085c/- |
| Rv2081c/- | (cc=0.4949) | info on Rv2081c/- |
| Rv1074c/fadA3 | (cc=0.4893) | info on Rv1074c/fadA3 |
| Rv0692/- | (cc=0.4855) | info on Rv0692/- |
| Rv0390/- | (cc=0.4682) | info on Rv0390/- |
| Rv3510c/- | (cc=0.4643) | info on Rv3510c/- |
| Rv1523/- | (cc=0.458) | info on Rv1523/- |
| Rv2360c/- | (cc=0.4568) | info on Rv2360c/- |
| Rv1590/- | (cc=0.4478) | info on Rv1590/- |
Correlation of Rv3230c/- with Rv0390/-
Normalized LFCs for Rv3230c/-:
(description and provenance of datasets)
| Rv3230c/- | Rv0390/- | |
| Fe_supp_jason_reseq | 1.118 | 0.077 |
| low_pH_jason_reseq | -2.28 | -0.768 |
| NO_jason_reseq | -0.845 | -0.662 |
| B6_jason_reseq | 0.018 | -2.729 |
| MHCII_jason_reseq | 0.613 | -2.878 |
| Isoniazid02 | 0.042 | 0.322 |
| Rifampicin4 | 0.658 | -0.279 |
| Ethambutol3 | 0.295 | 0.703 |
| Meropenem3 | -0.351 | -0.649 |
| Vancomycin16 | 0.838 | 0.432 |
| Rv2680_day32 | -0.428 | -3.135 |
| H37Rv_KO_MarP | -1.544 | 1.009 |
| hypoxia_3wks | 1.22 | -1.224 |
| hypoxia_6wks | -0.639 | -1.391 |
| glycerol | -4.991 | -2.44 |
| cholesterol | -2.671 | -4.512 |
| AJ | -0.822 | -2.726 |
| Bibs02 | -2.383 | -4.371 |
| Bibs02c | -2.902 | -4.267 |
| BL6 | -0.393 | -3.128 |
| BL6a | -1.967 | -3.462 |
| BXD01 | -1.526 | -2.432 |
| BXD010 | -0.935 | -1.157 |
| BXD011 | -0.42 | -2.191 |
| BXD03 | -1.709 | -1.273 |
| BXD04 | -1.516 | -1.798 |
| BXD05 | -0.7 | -2.39 |
| BXD06 | -1.326 | -2.224 |
| BXD07 | -1.482 | -2.543 |
| BXD08 | -1.17 | -2.985 |
| BXD09 | -1.416 | -3.22 |
| CAST | -0.911 | -2.052 |
| CCcont | -0.357 | -1.529 |
| DS01 | -2.046 | -2.854 |
| DS02 | -1.465 | -0.501 |
| DS04 | -0.238 | -2.863 |
| DS0c | -1.851 | -2.189 |
| GP01 | -1.483 | -0.093 |
| GP02 | -1.429 | -1.324 |
| GP0c | -1.832 | 0.497 |
| NOD | 0.0 | 0.093 |
| NZO | -0.433 | -3.602 |
| PWK | -0.034 | -1.033 |
| H37Rv_KO_CtpC | -2.325 | -1.387 |
| H37Rv_KO_CtpD | -0.35 | -0.379 |
| H37Rv_KO_Rv1272 | -0.306 | -1.59 |
| H37Rv_KO_SugABC | 0.54 | 0.817 |
| H37Rv_KO_MbtN | 0.386 | -0.482 |
| Trans05 | -1.065 | -1.956 |
| macrophage_unactivated | -0.054 | -0.603 |
| IL1 | 0.3 | -0.24 |
| Rapamycin | -1.587 | -0.178 |
| Tcell | -1.766 | -0.541 |
| GMCSF | -0.541 | 0.359 |
| IFNab | -0.384 | -0.626 |
| IFNg | 0.719 | -0.037 |
| IFNg_GMCSF1 | -0.399 | -0.999 |
| Rv1432_day32 | 0.226 | 0.343 |
| Rv1565c_day32 | -0.297 | -1.69 |
| secA2_input | -0.833 | -0.64 |
| delta_Rv3594 | -0.135 | -0.187 |
| delta_Rv3717 | -0.696 | -0.223 |
| delta_Rv3811 | -0.382 | -0.714 |
| delta_Rv0954 | 0.742 | -0.477 |
| PonA1 | -0.076 | 0.338 |
| EccD1_KO | -0.076 | 0.322 |
| EspI_KO | -0.827 | 0.77 |
| PE35_KO | -1.747 | -0.423 |
| PPE68_KO | -0.442 | 0.336 |
| glycerol2 | 0.0 | 0.277 |
| lignocerate | -1.011 | -0.582 |
| oleate | -0.425 | -0.771 |
| phosphatidylcholine | 0.399 | -0.431 |
| acetate | -1.25 | -1.019 |
| glucAc | -1.735 | -2.146 |
| Rv0950ko | -0.401 | 0.805 |
| Rv1096ko | -0.217 | 0.929 |
| Rv3684ko | 0.783 | 0.829 |
| delta_otsA_trehalose | 0.564 | 0.057 |