Top 10 genes with highest correlation to Rv3230c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3229c/desA3 | (cc=0.6832) | info on Rv3229c/desA3 |
| Rv1085c/- | (cc=0.5478) | info on Rv1085c/- |
| Rv2081c/- | (cc=0.4949) | info on Rv2081c/- |
| Rv1074c/fadA3 | (cc=0.4893) | info on Rv1074c/fadA3 |
| Rv0692/- | (cc=0.4855) | info on Rv0692/- |
| Rv0390/- | (cc=0.4682) | info on Rv0390/- |
| Rv3510c/- | (cc=0.4643) | info on Rv3510c/- |
| Rv1523/- | (cc=0.458) | info on Rv1523/- |
| Rv2360c/- | (cc=0.4568) | info on Rv2360c/- |
| Rv1590/- | (cc=0.4478) | info on Rv1590/- |
Correlation of Rv3230c/- with Rv3229c/desA3
Normalized LFCs for Rv3230c/-:
(description and provenance of datasets)
| Rv3230c/- | Rv3229c/desA3 | |
| Fe_supp_jason_reseq | 1.118 | 1.318 |
| low_pH_jason_reseq | -2.28 | -1.283 |
| NO_jason_reseq | -0.845 | -0.242 |
| B6_jason_reseq | 0.018 | 0.017 |
| MHCII_jason_reseq | 0.613 | 0.538 |
| Isoniazid02 | 0.042 | -0.215 |
| Rifampicin4 | 0.658 | -0.523 |
| Ethambutol3 | 0.295 | -0.473 |
| Meropenem3 | -0.351 | -0.851 |
| Vancomycin16 | 0.838 | 0.769 |
| Rv2680_day32 | -0.428 | -1.084 |
| H37Rv_KO_MarP | -1.544 | -1.983 |
| hypoxia_3wks | 1.22 | 1.304 |
| hypoxia_6wks | -0.639 | -0.56 |
| glycerol | -4.991 | -3.397 |
| cholesterol | -2.671 | -3.361 |
| AJ | -0.822 | -0.666 |
| Bibs02 | -2.383 | -2.394 |
| Bibs02c | -2.902 | -1.035 |
| BL6 | -0.393 | 0.817 |
| BL6a | -1.967 | -1.118 |
| BXD01 | -1.526 | -0.426 |
| BXD010 | -0.935 | -0.505 |
| BXD011 | -0.42 | 0.9 |
| BXD03 | -1.709 | -0.605 |
| BXD04 | -1.516 | -0.498 |
| BXD05 | -0.7 | 0.296 |
| BXD06 | -1.326 | -0.352 |
| BXD07 | -1.482 | -0.292 |
| BXD08 | -1.17 | -0.608 |
| BXD09 | -1.416 | -0.169 |
| CAST | -0.911 | -0.734 |
| CCcont | -0.357 | -0.159 |
| DS01 | -2.046 | -1.963 |
| DS02 | -1.465 | -1.987 |
| DS04 | -0.238 | -1.036 |
| DS0c | -1.851 | -1.433 |
| GP01 | -1.483 | 0.61 |
| GP02 | -1.429 | -0.504 |
| GP0c | -1.832 | -0.209 |
| NOD | 0.0 | 0.026 |
| NZO | -0.433 | -1.026 |
| PWK | -0.034 | -0.689 |
| H37Rv_KO_CtpC | -2.325 | -0.698 |
| H37Rv_KO_CtpD | -0.35 | 0.819 |
| H37Rv_KO_Rv1272 | -0.306 | 0.254 |
| H37Rv_KO_SugABC | 0.54 | 1.068 |
| H37Rv_KO_MbtN | 0.386 | -0.076 |
| Trans05 | -1.065 | -1.121 |
| macrophage_unactivated | -0.054 | 1.736 |
| IL1 | 0.3 | -0.35 |
| Rapamycin | -1.587 | -1.317 |
| Tcell | -1.766 | -1.975 |
| GMCSF | -0.541 | 0.718 |
| IFNab | -0.384 | -0.29 |
| IFNg | 0.719 | 1.433 |
| IFNg_GMCSF1 | -0.399 | 0.097 |
| Rv1432_day32 | 0.226 | 0.554 |
| Rv1565c_day32 | -0.297 | -0.242 |
| secA2_input | -0.833 | -0.072 |
| delta_Rv3594 | -0.135 | 0.249 |
| delta_Rv3717 | -0.696 | 0.273 |
| delta_Rv3811 | -0.382 | 0.485 |
| delta_Rv0954 | 0.742 | 1.062 |
| PonA1 | -0.076 | 0.0 |
| EccD1_KO | -0.076 | -1.256 |
| EspI_KO | -0.827 | -1.417 |
| PE35_KO | -1.747 | -2.272 |
| PPE68_KO | -0.442 | -1.155 |
| glycerol2 | 0.0 | 0.643 |
| lignocerate | -1.011 | 0.662 |
| oleate | -0.425 | 0.241 |
| phosphatidylcholine | 0.399 | 0.929 |
| acetate | -1.25 | 0.763 |
| glucAc | -1.735 | 1.236 |
| Rv0950ko | -0.401 | -0.464 |
| Rv1096ko | -0.217 | 0.087 |
| Rv3684ko | 0.783 | 0.075 |
| delta_otsA_trehalose | 0.564 | 0.591 |