Top 10 genes with highest correlation to Rv3220c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1626/- | (cc=0.8863) | info on Rv1626/- |
| Rv0554/bpoC | (cc=0.5784) | info on Rv0554/bpoC |
| Rv2684/arsA | (cc=0.5617) | info on Rv2684/arsA |
| Rv0270/fadD2 | (cc=0.5348) | info on Rv0270/fadD2 |
| Rv2752c/- | (cc=0.5152) | info on Rv2752c/- |
| Rv3136/PPE51 | (cc=0.4992) | info on Rv3136/PPE51 |
| Rv2334/cysK1 | (cc=0.4636) | info on Rv2334/cysK1 |
| Rv3716c/- | (cc=0.4507) | info on Rv3716c/- |
| Rv1206/fadD6 | (cc=0.4484) | info on Rv1206/fadD6 |
| Rv2683/- | (cc=0.4368) | info on Rv2683/- |
Correlation of Rv3220c/- with Rv2684/arsA
Normalized LFCs for Rv3220c/-:
(description and provenance of datasets)
| Rv3220c/- | Rv2684/arsA | |
| Fe_supp_jason_reseq | 0.335 | 0.0 |
| low_pH_jason_reseq | 3.333 | 2.237 |
| NO_jason_reseq | 2.103 | 0.877 |
| B6_jason_reseq | 0.869 | 0.634 |
| MHCII_jason_reseq | -3.58 | -1.325 |
| Isoniazid02 | 1.884 | -0.116 |
| Rifampicin4 | -2.819 | 0.303 |
| Ethambutol3 | -0.972 | -0.088 |
| Meropenem3 | 5.59 | -0.038 |
| Vancomycin16 | -5.064 | 0.22 |
| Rv2680_day32 | -0.672 | 0.816 |
| H37Rv_KO_MarP | -0.78 | -1.139 |
| hypoxia_3wks | -4.147 | -3.585 |
| hypoxia_6wks | -3.942 | -2.451 |
| glycerol | 0.892 | -1.224 |
| cholesterol | -0.31 | -3.437 |
| AJ | -1.457 | -0.842 |
| Bibs02 | -3.649 | -1.592 |
| Bibs02c | -3.363 | -1.446 |
| BL6 | -2.872 | -0.167 |
| BL6a | -2.369 | -0.687 |
| BXD01 | -0.493 | 0.411 |
| BXD010 | -0.787 | -0.022 |
| BXD011 | -0.648 | 0.195 |
| BXD03 | -1.948 | -0.016 |
| BXD04 | -0.288 | 0.762 |
| BXD05 | -2.264 | -0.136 |
| BXD06 | -0.311 | 0.55 |
| BXD07 | -1.497 | -0.024 |
| BXD08 | 0.137 | -0.451 |
| BXD09 | -0.985 | 0.334 |
| CAST | -1.029 | -0.292 |
| CCcont | -0.565 | -0.161 |
| DS01 | -2.171 | -1.684 |
| DS02 | -0.947 | 0.049 |
| DS04 | -2.571 | -2.079 |
| DS0c | -2.035 | -0.478 |
| GP01 | -2.686 | -1.98 |
| GP02 | -2.263 | -2.124 |
| GP0c | -3.537 | -3.407 |
| NOD | -1.142 | -0.48 |
| NZO | 0.091 | -0.227 |
| PWK | -1.628 | -1.209 |
| H37Rv_KO_CtpC | -0.953 | -1.819 |
| H37Rv_KO_CtpD | -1.545 | -0.491 |
| H37Rv_KO_Rv1272 | -2.97 | -1.627 |
| H37Rv_KO_SugABC | -2.086 | -2.067 |
| H37Rv_KO_MbtN | -1.657 | -2.194 |
| Trans05 | -2.416 | -0.413 |
| macrophage_unactivated | -2.011 | -0.297 |
| IL1 | -3.283 | -1.43 |
| Rapamycin | -3.397 | -1.228 |
| Tcell | 0.772 | 1.857 |
| GMCSF | -1.476 | -1.88 |
| IFNab | -2.44 | -2.228 |
| IFNg | -2.405 | -1.646 |
| IFNg_GMCSF1 | 0.0 | -1.863 |
| Rv1432_day32 | 0.415 | -0.971 |
| Rv1565c_day32 | 0.0 | 0.207 |
| secA2_input | 0.449 | -0.808 |
| delta_Rv3594 | -4.309 | -2.229 |
| delta_Rv3717 | -2.752 | -2.517 |
| delta_Rv3811 | -4.348 | -2.477 |
| delta_Rv0954 | -2.283 | -1.507 |
| PonA1 | -2.039 | -0.386 |
| EccD1_KO | -0.566 | 0.845 |
| EspI_KO | -0.376 | 0.776 |
| PE35_KO | 0.353 | 2.158 |
| PPE68_KO | 0.224 | 1.68 |
| glycerol2 | -1.813 | -0.509 |
| lignocerate | -2.53 | 0.312 |
| oleate | -0.856 | -0.306 |
| phosphatidylcholine | -2.504 | -0.146 |
| acetate | 0.843 | 0.535 |
| glucAc | 0.8 | 0.46 |
| Rv0950ko | 0.419 | -0.826 |
| Rv1096ko | -2.325 | -0.268 |
| Rv3684ko | 0.498 | 0.845 |
| delta_otsA_trehalose | 0.201 | 0.098 |