Top 10 genes with highest correlation to Rv3197A/whiB7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0278c/PE_PGRS3 | (cc=0.6149) | info on Rv0278c/PE_PGRS3 |
| Rv1038c/esxJ | (cc=0.6146) | info on Rv1038c/esxJ |
| Rv3335c/- | (cc=0.5728) | info on Rv3335c/- |
| Rv2638/- | (cc=0.5601) | info on Rv2638/- |
| Rv0964c/- | (cc=0.5339) | info on Rv0964c/- |
| Rv2802c/- | (cc=0.524) | info on Rv2802c/- |
| Rv1999c/- | (cc=0.5212) | info on Rv1999c/- |
| Rv0776c/- | (cc=0.5153) | info on Rv0776c/- |
| Rv3208A/TB9.4 | (cc=0.5142) | info on Rv3208A/TB9.4 |
| Rv0008c/- | (cc=0.5113) | info on Rv0008c/- |
Correlation of Rv3197A/whiB7 with Rv1999c/-
Normalized LFCs for Rv3197A/whiB7:
(description and provenance of datasets)
| Rv3197A/whiB7 | Rv1999c/- | |
| Fe_supp_jason_reseq | -2.31 | 0.032 |
| low_pH_jason_reseq | -0.154 | -0.609 |
| NO_jason_reseq | -0.389 | 0.239 |
| B6_jason_reseq | 0.454 | -0.061 |
| MHCII_jason_reseq | -0.275 | 0.316 |
| Isoniazid02 | 2.123 | 0.188 |
| Rifampicin4 | -0.325 | 0.628 |
| Ethambutol3 | 0.207 | 0.17 |
| Meropenem3 | -0.231 | -0.29 |
| Vancomycin16 | -0.613 | 0.032 |
| Rv2680_day32 | 1.728 | 0.398 |
| H37Rv_KO_MarP | 0.988 | -0.042 |
| hypoxia_3wks | -1.412 | -0.227 |
| hypoxia_6wks | -2.41 | -0.397 |
| glycerol | 0.812 | -0.499 |
| cholesterol | 0.86 | -0.351 |
| AJ | -0.303 | -0.097 |
| Bibs02 | 1.477 | 0.007 |
| Bibs02c | -0.879 | -0.088 |
| BL6 | -0.103 | -0.925 |
| BL6a | -1.537 | -0.676 |
| BXD01 | 0.651 | -0.679 |
| BXD010 | -1.758 | -0.928 |
| BXD011 | -1.587 | -0.795 |
| BXD03 | -0.932 | -0.578 |
| BXD04 | -0.112 | -0.7 |
| BXD05 | -0.965 | -1.079 |
| BXD06 | -2.245 | -0.89 |
| BXD07 | -1.57 | -0.664 |
| BXD08 | -2.825 | -0.867 |
| BXD09 | -2.088 | -0.907 |
| CAST | -1.286 | -0.35 |
| CCcont | -0.548 | -0.974 |
| DS01 | 0.149 | 0.053 |
| DS02 | -3.738 | 0.118 |
| DS04 | -0.693 | 0.333 |
| DS0c | -0.866 | -0.515 |
| GP01 | 0.176 | 0.218 |
| GP02 | 0.84 | -0.615 |
| GP0c | -0.451 | -0.365 |
| NOD | -0.368 | -0.202 |
| NZO | -0.029 | -0.228 |
| PWK | 0.163 | -0.359 |
| H37Rv_KO_CtpC | -0.424 | -1.177 |
| H37Rv_KO_CtpD | -0.284 | -0.724 |
| H37Rv_KO_Rv1272 | -0.303 | -0.021 |
| H37Rv_KO_SugABC | 1.056 | -0.338 |
| H37Rv_KO_MbtN | -0.278 | -0.29 |
| Trans05 | 0.143 | -0.035 |
| macrophage_unactivated | 0.66 | -0.038 |
| IL1 | -2.346 | -0.522 |
| Rapamycin | -1.946 | -0.623 |
| Tcell | -0.671 | -0.238 |
| GMCSF | 1.281 | 0.356 |
| IFNab | -0.302 | -0.78 |
| IFNg | -0.551 | -0.505 |
| IFNg_GMCSF1 | -1.405 | 0.072 |
| Rv1432_day32 | 0.18 | 0.248 |
| Rv1565c_day32 | 0.528 | 0.122 |
| secA2_input | -0.681 | -0.374 |
| delta_Rv3594 | -1.26 | -0.021 |
| delta_Rv3717 | -0.057 | 0.216 |
| delta_Rv3811 | -0.854 | 0.326 |
| delta_Rv0954 | -0.072 | -0.335 |
| PonA1 | -0.133 | -0.308 |
| EccD1_KO | -0.355 | 0.296 |
| EspI_KO | -0.69 | -0.088 |
| PE35_KO | 0.452 | 0.63 |
| PPE68_KO | 1.133 | 0.31 |
| glycerol2 | 2.409 | 0.765 |
| lignocerate | 3.184 | 0.848 |
| oleate | -0.829 | 0.119 |
| phosphatidylcholine | 2.648 | 0.899 |
| acetate | 3.694 | 0.648 |
| glucAc | 2.829 | 0.925 |
| Rv0950ko | -0.311 | 0.199 |
| Rv1096ko | -2.753 | -0.13 |
| Rv3684ko | -1.85 | 0.445 |
| delta_otsA_trehalose | 0.742 | 0.475 |