Top 10 genes with highest correlation to Rv3197A/whiB7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0278c/PE_PGRS3 | (cc=0.6149) | info on Rv0278c/PE_PGRS3 |
| Rv1038c/esxJ | (cc=0.6146) | info on Rv1038c/esxJ |
| Rv3335c/- | (cc=0.5728) | info on Rv3335c/- |
| Rv2638/- | (cc=0.5601) | info on Rv2638/- |
| Rv0964c/- | (cc=0.5339) | info on Rv0964c/- |
| Rv2802c/- | (cc=0.524) | info on Rv2802c/- |
| Rv1999c/- | (cc=0.5212) | info on Rv1999c/- |
| Rv0776c/- | (cc=0.5153) | info on Rv0776c/- |
| Rv3208A/TB9.4 | (cc=0.5142) | info on Rv3208A/TB9.4 |
| Rv0008c/- | (cc=0.5113) | info on Rv0008c/- |
Correlation of Rv3197A/whiB7 with Rv0008c/-
Normalized LFCs for Rv3197A/whiB7:
(description and provenance of datasets)
| Rv3197A/whiB7 | Rv0008c/- | |
| Fe_supp_jason_reseq | -2.31 | -2.052 |
| low_pH_jason_reseq | -0.154 | -0.85 |
| NO_jason_reseq | -0.389 | 1.575 |
| B6_jason_reseq | 0.454 | 2.298 |
| MHCII_jason_reseq | -0.275 | 1.965 |
| Isoniazid02 | 2.123 | 0.56 |
| Rifampicin4 | -0.325 | 0.412 |
| Ethambutol3 | 0.207 | 0.27 |
| Meropenem3 | -0.231 | -0.231 |
| Vancomycin16 | -0.613 | 0.979 |
| Rv2680_day32 | 1.728 | 0.0 |
| H37Rv_KO_MarP | 0.988 | 0.113 |
| hypoxia_3wks | -1.412 | -0.702 |
| hypoxia_6wks | -2.41 | -0.1 |
| glycerol | 0.812 | 0.856 |
| cholesterol | 0.86 | 0.366 |
| AJ | -0.303 | 0.449 |
| Bibs02 | 1.477 | 1.347 |
| Bibs02c | -0.879 | -0.973 |
| BL6 | -0.103 | -0.648 |
| BL6a | -1.537 | -3.221 |
| BXD01 | 0.651 | -1.653 |
| BXD010 | -1.758 | -2.357 |
| BXD011 | -1.587 | -2.539 |
| BXD03 | -0.932 | -1.169 |
| BXD04 | -0.112 | -3.059 |
| BXD05 | -0.965 | -0.609 |
| BXD06 | -2.245 | -1.85 |
| BXD07 | -1.57 | -1.757 |
| BXD08 | -2.825 | -1.279 |
| BXD09 | -2.088 | -1.863 |
| CAST | -1.286 | 0.349 |
| CCcont | -0.548 | -0.603 |
| DS01 | 0.149 | 0.186 |
| DS02 | -3.738 | -0.263 |
| DS04 | -0.693 | 1.214 |
| DS0c | -0.866 | -0.955 |
| GP01 | 0.176 | 0.797 |
| GP02 | 0.84 | -0.164 |
| GP0c | -0.451 | 1.374 |
| NOD | -0.368 | 0.762 |
| NZO | -0.029 | -0.241 |
| PWK | 0.163 | 0.965 |
| H37Rv_KO_CtpC | -0.424 | -0.258 |
| H37Rv_KO_CtpD | -0.284 | 1.101 |
| H37Rv_KO_Rv1272 | -0.303 | 0.282 |
| H37Rv_KO_SugABC | 1.056 | 0.062 |
| H37Rv_KO_MbtN | -0.278 | -1.337 |
| Trans05 | 0.143 | -1.893 |
| macrophage_unactivated | 0.66 | -0.83 |
| IL1 | -2.346 | -1.978 |
| Rapamycin | -1.946 | -0.43 |
| Tcell | -0.671 | -2.923 |
| GMCSF | 1.281 | -1.993 |
| IFNab | -0.302 | -2.283 |
| IFNg | -0.551 | -3.127 |
| IFNg_GMCSF1 | -1.405 | -1.034 |
| Rv1432_day32 | 0.18 | 0.755 |
| Rv1565c_day32 | 0.528 | 0.0 |
| secA2_input | -0.681 | -2.232 |
| delta_Rv3594 | -1.26 | 0.601 |
| delta_Rv3717 | -0.057 | 1.058 |
| delta_Rv3811 | -0.854 | -1.393 |
| delta_Rv0954 | -0.072 | -0.368 |
| PonA1 | -0.133 | 0.12 |
| EccD1_KO | -0.355 | -0.362 |
| EspI_KO | -0.69 | -0.893 |
| PE35_KO | 0.452 | -0.248 |
| PPE68_KO | 1.133 | 0.362 |
| glycerol2 | 2.409 | 2.742 |
| lignocerate | 3.184 | 3.004 |
| oleate | -0.829 | 0.788 |
| phosphatidylcholine | 2.648 | 2.22 |
| acetate | 3.694 | 4.201 |
| glucAc | 2.829 | 2.715 |
| Rv0950ko | -0.311 | 1.158 |
| Rv1096ko | -2.753 | 1.583 |
| Rv3684ko | -1.85 | 2.103 |
| delta_otsA_trehalose | 0.742 | 0.711 |