Top 10 genes with highest correlation to Rv3197A/whiB7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0278c/PE_PGRS3 | (cc=0.6149) | info on Rv0278c/PE_PGRS3 |
| Rv1038c/esxJ | (cc=0.6146) | info on Rv1038c/esxJ |
| Rv3335c/- | (cc=0.5728) | info on Rv3335c/- |
| Rv2638/- | (cc=0.5601) | info on Rv2638/- |
| Rv0964c/- | (cc=0.5339) | info on Rv0964c/- |
| Rv2802c/- | (cc=0.524) | info on Rv2802c/- |
| Rv1999c/- | (cc=0.5212) | info on Rv1999c/- |
| Rv0776c/- | (cc=0.5153) | info on Rv0776c/- |
| Rv3208A/TB9.4 | (cc=0.5142) | info on Rv3208A/TB9.4 |
| Rv0008c/- | (cc=0.5113) | info on Rv0008c/- |
Correlation of Rv3197A/whiB7 with Rv0776c/-
Normalized LFCs for Rv3197A/whiB7:
(description and provenance of datasets)
| Rv3197A/whiB7 | Rv0776c/- | |
| Fe_supp_jason_reseq | -2.31 | -0.347 |
| low_pH_jason_reseq | -0.154 | 0.704 |
| NO_jason_reseq | -0.389 | 0.585 |
| B6_jason_reseq | 0.454 | -0.505 |
| MHCII_jason_reseq | -0.275 | 0.259 |
| Isoniazid02 | 2.123 | 0.327 |
| Rifampicin4 | -0.325 | -0.125 |
| Ethambutol3 | 0.207 | 0.198 |
| Meropenem3 | -0.231 | 0.0 |
| Vancomycin16 | -0.613 | 0.167 |
| Rv2680_day32 | 1.728 | 0.0 |
| H37Rv_KO_MarP | 0.988 | 0.344 |
| hypoxia_3wks | -1.412 | 0.0 |
| hypoxia_6wks | -2.41 | -0.269 |
| glycerol | 0.812 | 0.032 |
| cholesterol | 0.86 | 0.219 |
| AJ | -0.303 | 0.408 |
| Bibs02 | 1.477 | 0.378 |
| Bibs02c | -0.879 | -0.312 |
| BL6 | -0.103 | 0.015 |
| BL6a | -1.537 | -0.585 |
| BXD01 | 0.651 | -0.549 |
| BXD010 | -1.758 | -0.97 |
| BXD011 | -1.587 | -0.642 |
| BXD03 | -0.932 | -0.833 |
| BXD04 | -0.112 | -0.399 |
| BXD05 | -0.965 | -0.799 |
| BXD06 | -2.245 | -0.862 |
| BXD07 | -1.57 | -0.494 |
| BXD08 | -2.825 | -0.211 |
| BXD09 | -2.088 | -0.663 |
| CAST | -1.286 | -0.195 |
| CCcont | -0.548 | -0.317 |
| DS01 | 0.149 | 0.0 |
| DS02 | -3.738 | -0.69 |
| DS04 | -0.693 | 0.039 |
| DS0c | -0.866 | -0.548 |
| GP01 | 0.176 | -0.088 |
| GP02 | 0.84 | 0.496 |
| GP0c | -0.451 | -0.69 |
| NOD | -0.368 | -0.5 |
| NZO | -0.029 | -0.6 |
| PWK | 0.163 | -0.175 |
| H37Rv_KO_CtpC | -0.424 | -0.288 |
| H37Rv_KO_CtpD | -0.284 | 0.633 |
| H37Rv_KO_Rv1272 | -0.303 | -0.171 |
| H37Rv_KO_SugABC | 1.056 | 0.192 |
| H37Rv_KO_MbtN | -0.278 | -0.327 |
| Trans05 | 0.143 | 0.142 |
| macrophage_unactivated | 0.66 | 0.076 |
| IL1 | -2.346 | 0.047 |
| Rapamycin | -1.946 | 0.025 |
| Tcell | -0.671 | 0.209 |
| GMCSF | 1.281 | -0.385 |
| IFNab | -0.302 | -0.1 |
| IFNg | -0.551 | -0.743 |
| IFNg_GMCSF1 | -1.405 | 0.6 |
| Rv1432_day32 | 0.18 | -0.232 |
| Rv1565c_day32 | 0.528 | -0.096 |
| secA2_input | -0.681 | 0.75 |
| delta_Rv3594 | -1.26 | 0.3 |
| delta_Rv3717 | -0.057 | 0.736 |
| delta_Rv3811 | -0.854 | 0.928 |
| delta_Rv0954 | -0.072 | 0.342 |
| PonA1 | -0.133 | 0.362 |
| EccD1_KO | -0.355 | -0.638 |
| EspI_KO | -0.69 | -0.807 |
| PE35_KO | 0.452 | -0.228 |
| PPE68_KO | 1.133 | 0.211 |
| glycerol2 | 2.409 | 0.761 |
| lignocerate | 3.184 | 1.37 |
| oleate | -0.829 | 0.485 |
| phosphatidylcholine | 2.648 | 1.025 |
| acetate | 3.694 | 1.371 |
| glucAc | 2.829 | 0.961 |
| Rv0950ko | -0.311 | 0.106 |
| Rv1096ko | -2.753 | 0.552 |
| Rv3684ko | -1.85 | 0.255 |
| delta_otsA_trehalose | 0.742 | 0.026 |