Top 10 genes with highest correlation to Rv3169/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3652/PE_PGRS60 | (cc=0.4912) | info on Rv3652/PE_PGRS60 |
| Rv3091/- | (cc=0.4839) | info on Rv3091/- |
| Rv1046c/- | (cc=0.4329) | info on Rv1046c/- |
| Rv1967/mce3B | (cc=0.4307) | info on Rv1967/mce3B |
| Rv1936/- | (cc=0.4055) | info on Rv1936/- |
| Rv0569/- | (cc=0.405) | info on Rv0569/- |
| Rv2578c/- | (cc=0.4045) | info on Rv2578c/- |
| Rv2701c/suhB | (cc=0.3862) | info on Rv2701c/suhB |
| Rv0753c/mmsA | (cc=0.3787) | info on Rv0753c/mmsA |
| Rv0613c/- | (cc=0.3731) | info on Rv0613c/- |
Correlation of Rv3169/- with Rv2578c/-
Normalized LFCs for Rv3169/-:
(description and provenance of datasets)
| Rv3169/- | Rv2578c/- | |
| Fe_supp_jason_reseq | -1.097 | -0.804 |
| low_pH_jason_reseq | 0.299 | 0.843 |
| NO_jason_reseq | 0.055 | 0.473 |
| B6_jason_reseq | -0.525 | -0.467 |
| MHCII_jason_reseq | -0.2 | 0.441 |
| Isoniazid02 | 0.122 | -0.228 |
| Rifampicin4 | -0.574 | -0.038 |
| Ethambutol3 | -0.347 | 0.0 |
| Meropenem3 | -0.122 | -0.338 |
| Vancomycin16 | 1.711 | 0.21 |
| Rv2680_day32 | -0.208 | 0.382 |
| H37Rv_KO_MarP | -0.66 | 0.281 |
| hypoxia_3wks | 0.407 | 0.116 |
| hypoxia_6wks | -0.434 | -0.092 |
| glycerol | 0.664 | 0.05 |
| cholesterol | 1.087 | -0.193 |
| AJ | 0.274 | -0.165 |
| Bibs02 | -0.682 | -0.257 |
| Bibs02c | -0.112 | -0.164 |
| BL6 | -1.073 | -0.443 |
| BL6a | -0.595 | -0.702 |
| BXD01 | -0.79 | -1.127 |
| BXD010 | -0.536 | -0.713 |
| BXD011 | -0.17 | -0.63 |
| BXD03 | 0.082 | -0.577 |
| BXD04 | 0.515 | -0.612 |
| BXD05 | -0.331 | -0.901 |
| BXD06 | -0.401 | -0.91 |
| BXD07 | -0.397 | -0.578 |
| BXD08 | -0.418 | -0.381 |
| BXD09 | 0.14 | -0.668 |
| CAST | 0.252 | 0.14 |
| CCcont | -0.746 | -1.072 |
| DS01 | -0.101 | -0.152 |
| DS02 | -0.507 | -0.126 |
| DS04 | 1.301 | 0.874 |
| DS0c | -0.563 | -0.055 |
| GP01 | 0.694 | -0.275 |
| GP02 | 0.944 | -0.245 |
| GP0c | 0.013 | -0.825 |
| NOD | -0.438 | -0.465 |
| NZO | -0.315 | 0.526 |
| PWK | -0.193 | 0.307 |
| H37Rv_KO_CtpC | 0.034 | -0.708 |
| H37Rv_KO_CtpD | -0.491 | 0.679 |
| H37Rv_KO_Rv1272 | 0.232 | 0.317 |
| H37Rv_KO_SugABC | -1.775 | -1.454 |
| H37Rv_KO_MbtN | -1.131 | 0.128 |
| Trans05 | -1.357 | -0.374 |
| macrophage_unactivated | 0.0 | -1.881 |
| IL1 | 0.0 | -0.033 |
| Rapamycin | 0.132 | 0.034 |
| Tcell | -0.886 | -1.004 |
| GMCSF | 0.539 | 0.52 |
| IFNab | 0.172 | -0.423 |
| IFNg | 0.152 | -0.714 |
| IFNg_GMCSF1 | 0.437 | -0.289 |
| Rv1432_day32 | -0.043 | 0.141 |
| Rv1565c_day32 | 0.466 | -0.362 |
| secA2_input | 0.131 | 0.564 |
| delta_Rv3594 | 0.22 | 0.139 |
| delta_Rv3717 | 0.736 | -0.711 |
| delta_Rv3811 | -0.271 | -1.025 |
| delta_Rv0954 | -0.637 | -0.125 |
| PonA1 | -0.394 | -0.723 |
| EccD1_KO | 0.257 | 0.398 |
| EspI_KO | 1.115 | 0.918 |
| PE35_KO | 0.528 | -0.271 |
| PPE68_KO | 0.71 | 0.442 |
| glycerol2 | 0.193 | -0.622 |
| lignocerate | 0.0 | -0.723 |
| oleate | 0.373 | -0.5 |
| phosphatidylcholine | 0.34 | -0.59 |
| acetate | -0.298 | -0.088 |
| glucAc | 0.313 | -0.172 |
| Rv0950ko | 0.561 | 0.103 |
| Rv1096ko | 0.691 | 0.051 |
| Rv3684ko | 0.888 | 0.056 |
| delta_otsA_trehalose | 0.858 | 0.472 |