Top 10 genes with highest correlation to Rv3160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0296c/- | (cc=0.7055) | info on Rv0296c/- |
| Rv2140c/TB18.6 | (cc=0.6065) | info on Rv2140c/TB18.6 |
| Rv1069c/- | (cc=0.6057) | info on Rv1069c/- |
| Rv1193/fadD36 | (cc=0.568) | info on Rv1193/fadD36 |
| Rv1829/- | (cc=0.5616) | info on Rv1829/- |
| Rv0249c/- | (cc=0.5533) | info on Rv0249c/- |
| Rv1074c/fadA3 | (cc=0.5509) | info on Rv1074c/fadA3 |
| Rv2989/- | (cc=0.5508) | info on Rv2989/- |
| Rv0247c/- | (cc=0.5496) | info on Rv0247c/- |
| Rv0248c/- | (cc=0.5492) | info on Rv0248c/- |
Correlation of Rv3160c/- with Rv2989/-
Normalized LFCs for Rv3160c/-:
(description and provenance of datasets)
| Rv3160c/- | Rv2989/- | |
| Fe_supp_jason_reseq | 0.881 | 3.044 |
| low_pH_jason_reseq | -3.092 | -1.673 |
| NO_jason_reseq | -4.489 | -3.071 |
| B6_jason_reseq | -2.051 | -1.298 |
| MHCII_jason_reseq | -1.806 | -1.806 |
| Isoniazid02 | -1.491 | -1.534 |
| Rifampicin4 | 2.708 | 0.141 |
| Ethambutol3 | 3.085 | 2.022 |
| Meropenem3 | 0.308 | 0.902 |
| Vancomycin16 | -0.268 | 0.65 |
| Rv2680_day32 | -2.089 | -2.939 |
| H37Rv_KO_MarP | -1.269 | -1.521 |
| hypoxia_3wks | -3.381 | -2.054 |
| hypoxia_6wks | -3.571 | -2.76 |
| glycerol | -1.712 | -3.397 |
| cholesterol | -0.967 | -3.158 |
| AJ | -1.966 | -4.686 |
| Bibs02 | -2.265 | -1.534 |
| Bibs02c | -1.076 | -3.675 |
| BL6 | -1.144 | -3.258 |
| BL6a | -1.956 | -4.84 |
| BXD01 | -1.613 | -3.64 |
| BXD010 | -1.471 | -3.579 |
| BXD011 | -0.998 | -3.56 |
| BXD03 | -1.81 | -3.779 |
| BXD04 | -0.969 | -3.456 |
| BXD05 | -0.975 | -3.761 |
| BXD06 | -0.752 | -3.597 |
| BXD07 | -1.715 | -3.87 |
| BXD08 | -1.415 | -3.717 |
| BXD09 | -0.939 | -3.927 |
| CAST | -2.107 | -3.714 |
| CCcont | 1.685 | -2.131 |
| DS01 | -1.851 | -3.179 |
| DS02 | -2.911 | -3.044 |
| DS04 | -1.405 | -3.733 |
| DS0c | -1.985 | -4.173 |
| GP01 | -1.322 | -2.759 |
| GP02 | -1.031 | -2.325 |
| GP0c | -1.741 | -3.634 |
| NOD | -0.675 | -3.023 |
| NZO | -2.67 | -4.13 |
| PWK | -2.626 | -2.914 |
| H37Rv_KO_CtpC | -0.76 | -0.035 |
| H37Rv_KO_CtpD | 1.353 | 0.587 |
| H37Rv_KO_Rv1272 | -0.319 | -3.941 |
| H37Rv_KO_SugABC | -0.84 | -2.349 |
| H37Rv_KO_MbtN | 1.424 | -1.734 |
| Trans05 | -1.024 | -3.652 |
| macrophage_unactivated | -0.505 | -0.259 |
| IL1 | -0.113 | 1.32 |
| Rapamycin | 0.227 | 0.577 |
| Tcell | 3.135 | 3.812 |
| GMCSF | -2.445 | -0.57 |
| IFNab | -2.382 | -0.381 |
| IFNg | -1.042 | 0.0 |
| IFNg_GMCSF1 | -1.898 | -1.474 |
| Rv1432_day32 | -2.331 | -4.963 |
| Rv1565c_day32 | -2.443 | -0.599 |
| secA2_input | -0.504 | 0.266 |
| delta_Rv3594 | 0.08 | -2.857 |
| delta_Rv3717 | -0.137 | -3.132 |
| delta_Rv3811 | -0.528 | -2.134 |
| delta_Rv0954 | 0.744 | -1.168 |
| PonA1 | -0.572 | 0.023 |
| EccD1_KO | 1.46 | 0.589 |
| EspI_KO | 1.3 | -0.673 |
| PE35_KO | 0.592 | 0.726 |
| PPE68_KO | 0.787 | -0.086 |
| glycerol2 | 2.413 | -1.749 |
| lignocerate | 0.0 | -2.177 |
| oleate | 0.0 | -2.535 |
| phosphatidylcholine | 0.0 | -0.766 |
| acetate | 0.437 | 0.296 |
| glucAc | 1.481 | 0.578 |
| Rv0950ko | 0.802 | 0.425 |
| Rv1096ko | -1.182 | -1.252 |
| Rv3684ko | -0.662 | -1.847 |
| delta_otsA_trehalose | 3.118 | -3.01 |