Top 10 genes with highest correlation to Rv3160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0296c/- | (cc=0.7055) | info on Rv0296c/- |
| Rv2140c/TB18.6 | (cc=0.6065) | info on Rv2140c/TB18.6 |
| Rv1069c/- | (cc=0.6057) | info on Rv1069c/- |
| Rv1193/fadD36 | (cc=0.568) | info on Rv1193/fadD36 |
| Rv1829/- | (cc=0.5616) | info on Rv1829/- |
| Rv0249c/- | (cc=0.5533) | info on Rv0249c/- |
| Rv1074c/fadA3 | (cc=0.5509) | info on Rv1074c/fadA3 |
| Rv2989/- | (cc=0.5508) | info on Rv2989/- |
| Rv0247c/- | (cc=0.5496) | info on Rv0247c/- |
| Rv0248c/- | (cc=0.5492) | info on Rv0248c/- |
Correlation of Rv3160c/- with Rv1829/-
Normalized LFCs for Rv3160c/-:
(description and provenance of datasets)
| Rv3160c/- | Rv1829/- | |
| Fe_supp_jason_reseq | 0.881 | -0.062 |
| low_pH_jason_reseq | -3.092 | -0.663 |
| NO_jason_reseq | -4.489 | -3.226 |
| B6_jason_reseq | -2.051 | -3.226 |
| MHCII_jason_reseq | -1.806 | -2.269 |
| Isoniazid02 | -1.491 | 2.057 |
| Rifampicin4 | 2.708 | 1.099 |
| Ethambutol3 | 3.085 | 1.321 |
| Meropenem3 | 0.308 | -1.388 |
| Vancomycin16 | -0.268 | 1.162 |
| Rv2680_day32 | -2.089 | -0.8 |
| H37Rv_KO_MarP | -1.269 | -2.028 |
| hypoxia_3wks | -3.381 | -0.279 |
| hypoxia_6wks | -3.571 | -0.856 |
| glycerol | -1.712 | 0.576 |
| cholesterol | -0.967 | -0.294 |
| AJ | -1.966 | -1.729 |
| Bibs02 | -2.265 | -3.113 |
| Bibs02c | -1.076 | -2.827 |
| BL6 | -1.144 | -1.787 |
| BL6a | -1.956 | 0.079 |
| BXD01 | -1.613 | -1.496 |
| BXD010 | -1.471 | -1.066 |
| BXD011 | -0.998 | 0.051 |
| BXD03 | -1.81 | -0.952 |
| BXD04 | -0.969 | -0.191 |
| BXD05 | -0.975 | 0.297 |
| BXD06 | -0.752 | -0.374 |
| BXD07 | -1.715 | -0.975 |
| BXD08 | -1.415 | -1.107 |
| BXD09 | -0.939 | -0.12 |
| CAST | -2.107 | -2.508 |
| CCcont | 1.685 | 1.496 |
| DS01 | -1.851 | -1.311 |
| DS02 | -2.911 | -3.486 |
| DS04 | -1.405 | -0.443 |
| DS0c | -1.985 | -2.011 |
| GP01 | -1.322 | 0.425 |
| GP02 | -1.031 | 0.263 |
| GP0c | -1.741 | 0.694 |
| NOD | -0.675 | -1.769 |
| NZO | -2.67 | -1.176 |
| PWK | -2.626 | -2.965 |
| H37Rv_KO_CtpC | -0.76 | -0.371 |
| H37Rv_KO_CtpD | 1.353 | 0.0 |
| H37Rv_KO_Rv1272 | -0.319 | 0.084 |
| H37Rv_KO_SugABC | -0.84 | 1.277 |
| H37Rv_KO_MbtN | 1.424 | 2.41 |
| Trans05 | -1.024 | -0.202 |
| macrophage_unactivated | -0.505 | 0.527 |
| IL1 | -0.113 | 0.219 |
| Rapamycin | 0.227 | 0.58 |
| Tcell | 3.135 | 1.033 |
| GMCSF | -2.445 | 0.673 |
| IFNab | -2.382 | 1.533 |
| IFNg | -1.042 | -0.826 |
| IFNg_GMCSF1 | -1.898 | -2.341 |
| Rv1432_day32 | -2.331 | -2.383 |
| Rv1565c_day32 | -2.443 | -1.741 |
| secA2_input | -0.504 | -0.789 |
| delta_Rv3594 | 0.08 | 2.452 |
| delta_Rv3717 | -0.137 | 1.781 |
| delta_Rv3811 | -0.528 | 2.074 |
| delta_Rv0954 | 0.744 | 1.499 |
| PonA1 | -0.572 | -0.196 |
| EccD1_KO | 1.46 | 1.039 |
| EspI_KO | 1.3 | 0.411 |
| PE35_KO | 0.592 | 0.945 |
| PPE68_KO | 0.787 | 1.037 |
| glycerol2 | 2.413 | 2.159 |
| lignocerate | 0.0 | -1.218 |
| oleate | 0.0 | -0.651 |
| phosphatidylcholine | 0.0 | -0.774 |
| acetate | 0.437 | -0.111 |
| glucAc | 1.481 | -0.785 |
| Rv0950ko | 0.802 | -0.142 |
| Rv1096ko | -1.182 | -1.731 |
| Rv3684ko | -0.662 | -2.473 |
| delta_otsA_trehalose | 3.118 | 0.002 |