Top 10 genes with highest correlation to Rv3160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0296c/- | (cc=0.7055) | info on Rv0296c/- |
| Rv2140c/TB18.6 | (cc=0.6065) | info on Rv2140c/TB18.6 |
| Rv1069c/- | (cc=0.6057) | info on Rv1069c/- |
| Rv1193/fadD36 | (cc=0.568) | info on Rv1193/fadD36 |
| Rv1829/- | (cc=0.5616) | info on Rv1829/- |
| Rv0249c/- | (cc=0.5533) | info on Rv0249c/- |
| Rv1074c/fadA3 | (cc=0.5509) | info on Rv1074c/fadA3 |
| Rv2989/- | (cc=0.5508) | info on Rv2989/- |
| Rv0247c/- | (cc=0.5496) | info on Rv0247c/- |
| Rv0248c/- | (cc=0.5492) | info on Rv0248c/- |
Correlation of Rv3160c/- with Rv0249c/-
Normalized LFCs for Rv3160c/-:
(description and provenance of datasets)
| Rv3160c/- | Rv0249c/- | |
| Fe_supp_jason_reseq | 0.881 | 1.841 |
| low_pH_jason_reseq | -3.092 | -1.255 |
| NO_jason_reseq | -4.489 | -3.961 |
| B6_jason_reseq | -2.051 | -1.674 |
| MHCII_jason_reseq | -1.806 | -1.37 |
| Isoniazid02 | -1.491 | 2.206 |
| Rifampicin4 | 2.708 | -0.384 |
| Ethambutol3 | 3.085 | 0.435 |
| Meropenem3 | 0.308 | 1.688 |
| Vancomycin16 | -0.268 | 0.0 |
| Rv2680_day32 | -2.089 | -3.066 |
| H37Rv_KO_MarP | -1.269 | 0.714 |
| hypoxia_3wks | -3.381 | -2.157 |
| hypoxia_6wks | -3.571 | -2.714 |
| glycerol | -1.712 | -2.681 |
| cholesterol | -0.967 | -0.26 |
| AJ | -1.966 | -2.795 |
| Bibs02 | -2.265 | -2.203 |
| Bibs02c | -1.076 | -2.402 |
| BL6 | -1.144 | -1.932 |
| BL6a | -1.956 | -2.907 |
| BXD01 | -1.613 | -1.496 |
| BXD010 | -1.471 | -1.701 |
| BXD011 | -0.998 | -1.691 |
| BXD03 | -1.81 | -0.907 |
| BXD04 | -0.969 | 0.209 |
| BXD05 | -0.975 | -2.079 |
| BXD06 | -0.752 | -1.461 |
| BXD07 | -1.715 | -1.932 |
| BXD08 | -1.415 | -2.054 |
| BXD09 | -0.939 | -2.062 |
| CAST | -2.107 | -1.984 |
| CCcont | 1.685 | 1.082 |
| DS01 | -1.851 | 0.286 |
| DS02 | -2.911 | 0.402 |
| DS04 | -1.405 | 0.0 |
| DS0c | -1.985 | 0.434 |
| GP01 | -1.322 | -1.796 |
| GP02 | -1.031 | -1.513 |
| GP0c | -1.741 | -2.235 |
| NOD | -0.675 | -1.507 |
| NZO | -2.67 | -2.783 |
| PWK | -2.626 | -1.773 |
| H37Rv_KO_CtpC | -0.76 | 0.142 |
| H37Rv_KO_CtpD | 1.353 | -1.091 |
| H37Rv_KO_Rv1272 | -0.319 | -1.968 |
| H37Rv_KO_SugABC | -0.84 | -0.939 |
| H37Rv_KO_MbtN | 1.424 | -0.977 |
| Trans05 | -1.024 | -2.128 |
| macrophage_unactivated | -0.505 | 1.054 |
| IL1 | -0.113 | -0.819 |
| Rapamycin | 0.227 | -0.196 |
| Tcell | 3.135 | 2.483 |
| GMCSF | -2.445 | -0.935 |
| IFNab | -2.382 | -1.318 |
| IFNg | -1.042 | -1.914 |
| IFNg_GMCSF1 | -1.898 | -1.647 |
| Rv1432_day32 | -2.331 | -2.85 |
| Rv1565c_day32 | -2.443 | -1.229 |
| secA2_input | -0.504 | -0.546 |
| delta_Rv3594 | 0.08 | -0.428 |
| delta_Rv3717 | -0.137 | -1.891 |
| delta_Rv3811 | -0.528 | -0.576 |
| delta_Rv0954 | 0.744 | 1.292 |
| PonA1 | -0.572 | 1.846 |
| EccD1_KO | 1.46 | 0.395 |
| EspI_KO | 1.3 | 0.442 |
| PE35_KO | 0.592 | 0.035 |
| PPE68_KO | 0.787 | 0.422 |
| glycerol2 | 2.413 | 4.467 |
| lignocerate | 0.0 | 0.431 |
| oleate | 0.0 | 5.156 |
| phosphatidylcholine | 0.0 | 1.162 |
| acetate | 0.437 | -0.78 |
| glucAc | 1.481 | 0.366 |
| Rv0950ko | 0.802 | 0.308 |
| Rv1096ko | -1.182 | -0.881 |
| Rv3684ko | -0.662 | -0.701 |
| delta_otsA_trehalose | 3.118 | -2.062 |