Top 10 genes with highest correlation to Rv3160c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0296c/- | (cc=0.7055) | info on Rv0296c/- |
| Rv2140c/TB18.6 | (cc=0.6065) | info on Rv2140c/TB18.6 |
| Rv1069c/- | (cc=0.6057) | info on Rv1069c/- |
| Rv1193/fadD36 | (cc=0.568) | info on Rv1193/fadD36 |
| Rv1829/- | (cc=0.5616) | info on Rv1829/- |
| Rv0249c/- | (cc=0.5533) | info on Rv0249c/- |
| Rv1074c/fadA3 | (cc=0.5509) | info on Rv1074c/fadA3 |
| Rv2989/- | (cc=0.5508) | info on Rv2989/- |
| Rv0247c/- | (cc=0.5496) | info on Rv0247c/- |
| Rv0248c/- | (cc=0.5492) | info on Rv0248c/- |
Correlation of Rv3160c/- with Rv0296c/-
Normalized LFCs for Rv3160c/-:
(description and provenance of datasets)
| Rv3160c/- | Rv0296c/- | |
| Fe_supp_jason_reseq | 0.881 | 0.589 |
| low_pH_jason_reseq | -3.092 | -1.272 |
| NO_jason_reseq | -4.489 | -3.127 |
| B6_jason_reseq | -2.051 | -1.253 |
| MHCII_jason_reseq | -1.806 | -0.655 |
| Isoniazid02 | -1.491 | -0.774 |
| Rifampicin4 | 2.708 | 0.024 |
| Ethambutol3 | 3.085 | 0.704 |
| Meropenem3 | 0.308 | 0.448 |
| Vancomycin16 | -0.268 | -0.244 |
| Rv2680_day32 | -2.089 | -1.512 |
| H37Rv_KO_MarP | -1.269 | 0.625 |
| hypoxia_3wks | -3.381 | -1.128 |
| hypoxia_6wks | -3.571 | -1.639 |
| glycerol | -1.712 | -0.777 |
| cholesterol | -0.967 | -1.049 |
| AJ | -1.966 | -1.681 |
| Bibs02 | -2.265 | -1.35 |
| Bibs02c | -1.076 | -0.724 |
| BL6 | -1.144 | -0.634 |
| BL6a | -1.956 | -1.185 |
| BXD01 | -1.613 | -1.922 |
| BXD010 | -1.471 | -0.517 |
| BXD011 | -0.998 | -0.688 |
| BXD03 | -1.81 | -0.313 |
| BXD04 | -0.969 | -0.863 |
| BXD05 | -0.975 | -0.682 |
| BXD06 | -0.752 | -1.06 |
| BXD07 | -1.715 | -1.118 |
| BXD08 | -1.415 | -1.095 |
| BXD09 | -0.939 | -1.559 |
| CAST | -2.107 | -1.433 |
| CCcont | 1.685 | 0.396 |
| DS01 | -1.851 | -1.304 |
| DS02 | -2.911 | -1.407 |
| DS04 | -1.405 | -0.6 |
| DS0c | -1.985 | -0.875 |
| GP01 | -1.322 | -0.579 |
| GP02 | -1.031 | -0.846 |
| GP0c | -1.741 | -0.674 |
| NOD | -0.675 | -1.067 |
| NZO | -2.67 | -2.373 |
| PWK | -2.626 | -1.614 |
| H37Rv_KO_CtpC | -0.76 | -0.721 |
| H37Rv_KO_CtpD | 1.353 | 0.619 |
| H37Rv_KO_Rv1272 | -0.319 | -0.778 |
| H37Rv_KO_SugABC | -0.84 | 0.533 |
| H37Rv_KO_MbtN | 1.424 | -0.894 |
| Trans05 | -1.024 | -0.982 |
| macrophage_unactivated | -0.505 | 0.117 |
| IL1 | -0.113 | -0.065 |
| Rapamycin | 0.227 | -0.479 |
| Tcell | 3.135 | 0.072 |
| GMCSF | -2.445 | -0.283 |
| IFNab | -2.382 | -0.181 |
| IFNg | -1.042 | 0.174 |
| IFNg_GMCSF1 | -1.898 | -0.544 |
| Rv1432_day32 | -2.331 | -1.216 |
| Rv1565c_day32 | -2.443 | -1.237 |
| secA2_input | -0.504 | 0.365 |
| delta_Rv3594 | 0.08 | -0.835 |
| delta_Rv3717 | -0.137 | -0.858 |
| delta_Rv3811 | -0.528 | -0.385 |
| delta_Rv0954 | 0.744 | 0.432 |
| PonA1 | -0.572 | 0.698 |
| EccD1_KO | 1.46 | 0.135 |
| EspI_KO | 1.3 | -0.04 |
| PE35_KO | 0.592 | -0.298 |
| PPE68_KO | 0.787 | 0.131 |
| glycerol2 | 2.413 | 0.553 |
| lignocerate | 0.0 | 0.241 |
| oleate | 0.0 | 0.191 |
| phosphatidylcholine | 0.0 | 0.168 |
| acetate | 0.437 | -0.427 |
| glucAc | 1.481 | -0.1 |
| Rv0950ko | 0.802 | -0.169 |
| Rv1096ko | -1.182 | -0.6 |
| Rv3684ko | -0.662 | -0.278 |
| delta_otsA_trehalose | 3.118 | -0.061 |