Top 10 genes with highest correlation to Rv3156/nuoL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3152/nuoH | (cc=0.778) | info on Rv3152/nuoH |
| Rv3153/nuoI | (cc=0.7526) | info on Rv3153/nuoI |
| Rv3158/nuoN | (cc=0.7425) | info on Rv3158/nuoN |
| Rv3145/nuoA | (cc=0.734) | info on Rv3145/nuoA |
| Rv3150/nuoF | (cc=0.7338) | info on Rv3150/nuoF |
| Rv3146/nuoB | (cc=0.7009) | info on Rv3146/nuoB |
| Rv3149/nuoE | (cc=0.6936) | info on Rv3149/nuoE |
| Rv3151/nuoG | (cc=0.6897) | info on Rv3151/nuoG |
| Rv3143/- | (cc=0.661) | info on Rv3143/- |
| Rv3116/moeB2 | (cc=0.6474) | info on Rv3116/moeB2 |
Correlation of Rv3156/nuoL with Rv3149/nuoE
Normalized LFCs for Rv3156/nuoL:
(description and provenance of datasets)
| Rv3156/nuoL | Rv3149/nuoE | |
| Fe_supp_jason_reseq | -0.41 | -1.402 |
| low_pH_jason_reseq | -1.186 | -1.064 |
| NO_jason_reseq | 0.0 | -0.528 |
| B6_jason_reseq | -0.787 | -1.568 |
| MHCII_jason_reseq | -0.544 | -2.33 |
| Isoniazid02 | -1.825 | -0.32 |
| Rifampicin4 | 1.021 | 0.032 |
| Ethambutol3 | -0.621 | -0.711 |
| Meropenem3 | -0.673 | -0.701 |
| Vancomycin16 | -0.223 | -0.621 |
| Rv2680_day32 | -0.524 | -0.885 |
| H37Rv_KO_MarP | -0.387 | -1.12 |
| hypoxia_3wks | 1.3 | 0.925 |
| hypoxia_6wks | 0.205 | 0.198 |
| glycerol | -0.234 | 1.071 |
| cholesterol | -0.898 | -0.088 |
| AJ | -0.269 | -0.141 |
| Bibs02 | 0.873 | -1.436 |
| Bibs02c | 1.105 | 0.159 |
| BL6 | 1.47 | 2.19 |
| BL6a | 1.808 | 1.474 |
| BXD01 | 1.047 | 2.417 |
| BXD010 | 1.308 | 1.666 |
| BXD011 | 1.707 | 1.142 |
| BXD03 | 1.502 | 1.47 |
| BXD04 | 0.693 | 1.491 |
| BXD05 | 1.772 | 0.836 |
| BXD06 | 1.533 | 1.894 |
| BXD07 | 1.371 | 2.279 |
| BXD08 | 1.052 | 1.832 |
| BXD09 | 1.346 | 1.852 |
| CAST | 0.123 | 1.165 |
| CCcont | 0.861 | 1.4 |
| DS01 | 1.169 | 0.857 |
| DS02 | 1.453 | 0.356 |
| DS04 | 1.703 | -0.332 |
| DS0c | 1.285 | 2.772 |
| GP01 | 1.605 | 1.761 |
| GP02 | 1.171 | -0.068 |
| GP0c | 1.551 | 2.305 |
| NOD | 0.867 | 1.692 |
| NZO | -0.055 | 0.327 |
| PWK | -0.29 | 0.112 |
| H37Rv_KO_CtpC | 1.177 | 1.549 |
| H37Rv_KO_CtpD | 2.074 | 1.511 |
| H37Rv_KO_Rv1272 | 1.498 | 3.235 |
| H37Rv_KO_SugABC | 2.384 | 1.555 |
| H37Rv_KO_MbtN | 0.829 | 1.725 |
| Trans05 | 1.208 | 1.465 |
| macrophage_unactivated | -0.316 | -0.524 |
| IL1 | 0.0 | -0.893 |
| Rapamycin | -0.15 | -0.402 |
| Tcell | -0.267 | 0.264 |
| GMCSF | -0.309 | -1.801 |
| IFNab | 0.097 | -0.363 |
| IFNg | 0.126 | -1.203 |
| IFNg_GMCSF1 | -0.314 | -0.066 |
| Rv1432_day32 | 0.134 | -0.008 |
| Rv1565c_day32 | -0.038 | 0.218 |
| secA2_input | -0.565 | -0.632 |
| delta_Rv3594 | 0.087 | 0.424 |
| delta_Rv3717 | 0.269 | -0.053 |
| delta_Rv3811 | -0.149 | 0.462 |
| delta_Rv0954 | 0.211 | 0.632 |
| PonA1 | 0.044 | 0.748 |
| EccD1_KO | -1.02 | 0.191 |
| EspI_KO | -0.884 | -1.098 |
| PE35_KO | -0.33 | -0.365 |
| PPE68_KO | -0.118 | 0.246 |
| glycerol2 | 1.914 | 3.017 |
| lignocerate | -0.852 | 0.38 |
| oleate | 2.375 | 3.021 |
| phosphatidylcholine | -0.744 | 0.598 |
| acetate | 0.572 | 0.944 |
| glucAc | 0.163 | 1.293 |
| Rv0950ko | 0.422 | 1.484 |
| Rv1096ko | 0.636 | 2.63 |
| Rv3684ko | 0.537 | 1.287 |
| delta_otsA_trehalose | 1.21 | -0.032 |