Top 10 genes with highest correlation to Rv3156/nuoL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3152/nuoH | (cc=0.778) | info on Rv3152/nuoH |
| Rv3153/nuoI | (cc=0.7526) | info on Rv3153/nuoI |
| Rv3158/nuoN | (cc=0.7425) | info on Rv3158/nuoN |
| Rv3145/nuoA | (cc=0.734) | info on Rv3145/nuoA |
| Rv3150/nuoF | (cc=0.7338) | info on Rv3150/nuoF |
| Rv3146/nuoB | (cc=0.7009) | info on Rv3146/nuoB |
| Rv3149/nuoE | (cc=0.6936) | info on Rv3149/nuoE |
| Rv3151/nuoG | (cc=0.6897) | info on Rv3151/nuoG |
| Rv3143/- | (cc=0.661) | info on Rv3143/- |
| Rv3116/moeB2 | (cc=0.6474) | info on Rv3116/moeB2 |
Correlation of Rv3156/nuoL with Rv3143/-
Normalized LFCs for Rv3156/nuoL:
(description and provenance of datasets)
| Rv3156/nuoL | Rv3143/- | |
| Fe_supp_jason_reseq | -0.41 | -1.877 |
| low_pH_jason_reseq | -1.186 | -1.143 |
| NO_jason_reseq | 0.0 | -1.208 |
| B6_jason_reseq | -0.787 | -4.188 |
| MHCII_jason_reseq | -0.544 | -1.39 |
| Isoniazid02 | -1.825 | 0.266 |
| Rifampicin4 | 1.021 | -0.295 |
| Ethambutol3 | -0.621 | -0.298 |
| Meropenem3 | -0.673 | 0.313 |
| Vancomycin16 | -0.223 | 0.117 |
| Rv2680_day32 | -0.524 | -0.985 |
| H37Rv_KO_MarP | -0.387 | -0.346 |
| hypoxia_3wks | 1.3 | 0.471 |
| hypoxia_6wks | 0.205 | -0.793 |
| glycerol | -0.234 | -2.776 |
| cholesterol | -0.898 | -0.689 |
| AJ | -0.269 | 0.116 |
| Bibs02 | 0.873 | 0.177 |
| Bibs02c | 1.105 | -0.285 |
| BL6 | 1.47 | 1.687 |
| BL6a | 1.808 | 1.581 |
| BXD01 | 1.047 | 1.228 |
| BXD010 | 1.308 | 3.555 |
| BXD011 | 1.707 | 2.162 |
| BXD03 | 1.502 | 1.924 |
| BXD04 | 0.693 | 1.727 |
| BXD05 | 1.772 | 3.618 |
| BXD06 | 1.533 | 1.509 |
| BXD07 | 1.371 | 2.527 |
| BXD08 | 1.052 | 1.527 |
| BXD09 | 1.346 | 2.053 |
| CAST | 0.123 | -0.918 |
| CCcont | 0.861 | 1.801 |
| DS01 | 1.169 | 0.725 |
| DS02 | 1.453 | 2.759 |
| DS04 | 1.703 | 2.292 |
| DS0c | 1.285 | 1.045 |
| GP01 | 1.605 | 1.656 |
| GP02 | 1.171 | 2.771 |
| GP0c | 1.551 | 2.04 |
| NOD | 0.867 | -2.696 |
| NZO | -0.055 | -0.272 |
| PWK | -0.29 | -2.062 |
| H37Rv_KO_CtpC | 1.177 | 0.588 |
| H37Rv_KO_CtpD | 2.074 | 1.365 |
| H37Rv_KO_Rv1272 | 1.498 | 0.909 |
| H37Rv_KO_SugABC | 2.384 | 3.633 |
| H37Rv_KO_MbtN | 0.829 | -0.373 |
| Trans05 | 1.208 | 2.717 |
| macrophage_unactivated | -0.316 | 0.65 |
| IL1 | 0.0 | -0.712 |
| Rapamycin | -0.15 | -0.951 |
| Tcell | -0.267 | 0.111 |
| GMCSF | -0.309 | 0.296 |
| IFNab | 0.097 | 0.339 |
| IFNg | 0.126 | 0.091 |
| IFNg_GMCSF1 | -0.314 | -0.503 |
| Rv1432_day32 | 0.134 | 1.781 |
| Rv1565c_day32 | -0.038 | 0.0 |
| secA2_input | -0.565 | -1.623 |
| delta_Rv3594 | 0.087 | 0.653 |
| delta_Rv3717 | 0.269 | 0.229 |
| delta_Rv3811 | -0.149 | -1.331 |
| delta_Rv0954 | 0.211 | 1.12 |
| PonA1 | 0.044 | -0.34 |
| EccD1_KO | -1.02 | 0.806 |
| EspI_KO | -0.884 | -0.428 |
| PE35_KO | -0.33 | 0.738 |
| PPE68_KO | -0.118 | 0.461 |
| glycerol2 | 1.914 | 1.648 |
| lignocerate | -0.852 | -0.207 |
| oleate | 2.375 | 0.645 |
| phosphatidylcholine | -0.744 | -0.324 |
| acetate | 0.572 | 1.662 |
| glucAc | 0.163 | 0.253 |
| Rv0950ko | 0.422 | -0.962 |
| Rv1096ko | 0.636 | 0.932 |
| Rv3684ko | 0.537 | 0.21 |
| delta_otsA_trehalose | 1.21 | 1.437 |