Top 10 genes with highest correlation to Rv3143/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3152/nuoH | (cc=0.74) | info on Rv3152/nuoH |
| Rv3151/nuoG | (cc=0.7101) | info on Rv3151/nuoG |
| Rv3150/nuoF | (cc=0.6843) | info on Rv3150/nuoF |
| Rv3156/nuoL | (cc=0.661) | info on Rv3156/nuoL |
| Rv3158/nuoN | (cc=0.6573) | info on Rv3158/nuoN |
| Rv2548/vapC19 | (cc=0.6341) | info on Rv2548/vapC19 |
| Rv3145/nuoA | (cc=0.6264) | info on Rv3145/nuoA |
| Rv3148/nuoD | (cc=0.6216) | info on Rv3148/nuoD |
| Rv3232c/ppk2 | (cc=0.6119) | info on Rv3232c/ppk2 |
| Rv3153/nuoI | (cc=0.6094) | info on Rv3153/nuoI |
Correlation of Rv3143/- with Rv3153/nuoI
Normalized LFCs for Rv3143/-:
(description and provenance of datasets)
| Rv3143/- | Rv3153/nuoI | |
| Fe_supp_jason_reseq | -1.877 | -0.287 |
| low_pH_jason_reseq | -1.143 | 0.087 |
| NO_jason_reseq | -1.208 | -0.641 |
| B6_jason_reseq | -4.188 | -0.048 |
| MHCII_jason_reseq | -1.39 | -1.143 |
| Isoniazid02 | 0.266 | -0.831 |
| Rifampicin4 | -0.295 | 0.171 |
| Ethambutol3 | -0.298 | -0.833 |
| Meropenem3 | 0.313 | -1.41 |
| Vancomycin16 | 0.117 | -1.037 |
| Rv2680_day32 | -0.985 | 0.447 |
| H37Rv_KO_MarP | -0.346 | -0.653 |
| hypoxia_3wks | 0.471 | 1.089 |
| hypoxia_6wks | -0.793 | 0.8 |
| glycerol | -2.776 | 0.233 |
| cholesterol | -0.689 | -0.306 |
| AJ | 0.116 | -0.168 |
| Bibs02 | 0.177 | -0.466 |
| Bibs02c | -0.285 | 0.274 |
| BL6 | 1.687 | 1.6 |
| BL6a | 1.581 | 1.855 |
| BXD01 | 1.228 | 1.737 |
| BXD010 | 3.555 | 1.805 |
| BXD011 | 2.162 | 2.199 |
| BXD03 | 1.924 | 1.505 |
| BXD04 | 1.727 | 1.562 |
| BXD05 | 3.618 | 1.926 |
| BXD06 | 1.509 | 1.917 |
| BXD07 | 2.527 | 1.59 |
| BXD08 | 1.527 | 2.086 |
| BXD09 | 2.053 | 1.922 |
| CAST | -0.918 | 0.04 |
| CCcont | 1.801 | 1.069 |
| DS01 | 0.725 | 0.616 |
| DS02 | 2.759 | 0.896 |
| DS04 | 2.292 | 0.426 |
| DS0c | 1.045 | 1.771 |
| GP01 | 1.656 | 0.68 |
| GP02 | 2.771 | 0.875 |
| GP0c | 2.04 | 0.823 |
| NOD | -2.696 | -0.291 |
| NZO | -0.272 | 0.0 |
| PWK | -2.062 | -0.293 |
| H37Rv_KO_CtpC | 0.588 | 0.611 |
| H37Rv_KO_CtpD | 1.365 | 1.755 |
| H37Rv_KO_Rv1272 | 0.909 | 1.526 |
| H37Rv_KO_SugABC | 3.633 | 0.935 |
| H37Rv_KO_MbtN | -0.373 | 0.018 |
| Trans05 | 2.717 | 1.287 |
| macrophage_unactivated | 0.65 | -0.199 |
| IL1 | -0.712 | -0.469 |
| Rapamycin | -0.951 | -0.11 |
| Tcell | 0.111 | -0.029 |
| GMCSF | 0.296 | 0.52 |
| IFNab | 0.339 | 0.571 |
| IFNg | 0.091 | -0.294 |
| IFNg_GMCSF1 | -0.503 | -0.085 |
| Rv1432_day32 | 1.781 | 0.259 |
| Rv1565c_day32 | 0.0 | -0.218 |
| secA2_input | -1.623 | -0.379 |
| delta_Rv3594 | 0.653 | -0.647 |
| delta_Rv3717 | 0.229 | -0.211 |
| delta_Rv3811 | -1.331 | 0.0 |
| delta_Rv0954 | 1.12 | -0.526 |
| PonA1 | -0.34 | -0.396 |
| EccD1_KO | 0.806 | 0.467 |
| EspI_KO | -0.428 | 0.0 |
| PE35_KO | 0.738 | 0.592 |
| PPE68_KO | 0.461 | 0.682 |
| glycerol2 | 1.648 | 1.883 |
| lignocerate | -0.207 | -0.582 |
| oleate | 0.645 | 2.298 |
| phosphatidylcholine | -0.324 | -0.669 |
| acetate | 1.662 | -0.259 |
| glucAc | 0.253 | 0.54 |
| Rv0950ko | -0.962 | 0.136 |
| Rv1096ko | 0.932 | 0.054 |
| Rv3684ko | 0.21 | -0.18 |
| delta_otsA_trehalose | 1.437 | -0.029 |