Top 10 genes with highest correlation to Rv3139/fadE24:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3140/fadE23 | (cc=0.8226) | info on Rv3140/fadE23 |
| Rv2051c/ppm1 | (cc=0.6099) | info on Rv2051c/ppm1 |
| Rv2594c/ruvC | (cc=0.6078) | info on Rv2594c/ruvC |
| Rv1592c/- | (cc=0.5928) | info on Rv1592c/- |
| Rv3717/- | (cc=0.5882) | info on Rv3717/- |
| Rv2525c/- | (cc=0.5808) | info on Rv2525c/- |
| Rv0437c/psd | (cc=0.5773) | info on Rv0437c/psd |
| Rv2476c/gdh | (cc=0.5698) | info on Rv2476c/gdh |
| Rv0436c/pssA | (cc=0.545) | info on Rv0436c/pssA |
| Rv0994/moeA1 | (cc=0.5087) | info on Rv0994/moeA1 |
Correlation of Rv3139/fadE24 with Rv3717/-
Normalized LFCs for Rv3139/fadE24:
(description and provenance of datasets)
| Rv3139/fadE24 | Rv3717/- | |
| Fe_supp_jason_reseq | 0.292 | -0.519 |
| low_pH_jason_reseq | -0.738 | -1.932 |
| NO_jason_reseq | -1.21 | -0.281 |
| B6_jason_reseq | -0.934 | -2.804 |
| MHCII_jason_reseq | -1.22 | -1.818 |
| Isoniazid02 | -0.604 | 1.168 |
| Rifampicin4 | -3.893 | -6.0 |
| Ethambutol3 | -2.126 | -0.287 |
| Meropenem3 | -3.097 | -2.356 |
| Vancomycin16 | -3.815 | -6.0 |
| Rv2680_day32 | -2.504 | -3.189 |
| H37Rv_KO_MarP | -1.547 | -0.351 |
| hypoxia_3wks | -0.77 | -3.194 |
| hypoxia_6wks | -0.054 | -2.443 |
| glycerol | -0.287 | -0.56 |
| cholesterol | -1.387 | 0.614 |
| AJ | -1.39 | -1.849 |
| Bibs02 | -0.758 | 1.507 |
| Bibs02c | -1.052 | -0.781 |
| BL6 | -0.629 | -0.497 |
| BL6a | -0.558 | -0.891 |
| BXD01 | -1.52 | -1.981 |
| BXD010 | -0.426 | -1.612 |
| BXD011 | -0.268 | -0.923 |
| BXD03 | -0.522 | -0.573 |
| BXD04 | -0.827 | -1.032 |
| BXD05 | -0.9 | -1.072 |
| BXD06 | -0.671 | -1.114 |
| BXD07 | -0.535 | -1.451 |
| BXD08 | -0.842 | -1.527 |
| BXD09 | -0.505 | -1.346 |
| CAST | -1.23 | -3.68 |
| CCcont | 0.979 | 1.67 |
| DS01 | -0.139 | 1.732 |
| DS02 | -0.309 | 1.068 |
| DS04 | -0.697 | -0.822 |
| DS0c | -0.357 | 0.79 |
| GP01 | -1.759 | -0.617 |
| GP02 | -1.4 | -1.33 |
| GP0c | -2.068 | -1.136 |
| NOD | 0.566 | -2.579 |
| NZO | -0.663 | -1.743 |
| PWK | -0.196 | -2.585 |
| H37Rv_KO_CtpC | -0.031 | 0.85 |
| H37Rv_KO_CtpD | 0.462 | 0.085 |
| H37Rv_KO_Rv1272 | -0.397 | -1.548 |
| H37Rv_KO_SugABC | -1.493 | -0.906 |
| H37Rv_KO_MbtN | -0.807 | -0.783 |
| Trans05 | -0.158 | -1.141 |
| macrophage_unactivated | -0.344 | -0.104 |
| IL1 | 0.228 | -0.685 |
| Rapamycin | -0.249 | 0.822 |
| Tcell | -0.544 | -0.753 |
| GMCSF | -1.31 | 0.636 |
| IFNab | 1.351 | 1.013 |
| IFNg | -0.949 | -1.109 |
| IFNg_GMCSF1 | -1.92 | -2.049 |
| Rv1432_day32 | -2.607 | -2.854 |
| Rv1565c_day32 | -0.965 | -1.515 |
| secA2_input | -0.086 | 1.677 |
| delta_Rv3594 | -2.521 | 0.456 |
| delta_Rv3717 | -2.81 | -3.861 |
| delta_Rv3811 | -2.06 | 0.378 |
| delta_Rv0954 | 1.925 | -0.142 |
| PonA1 | 0.822 | 1.084 |
| EccD1_KO | 0.303 | -0.355 |
| EspI_KO | 0.04 | -0.308 |
| PE35_KO | 0.079 | -0.026 |
| PPE68_KO | 0.0 | -0.227 |
| glycerol2 | -0.643 | -0.437 |
| lignocerate | -0.924 | -0.207 |
| oleate | -1.418 | -1.418 |
| phosphatidylcholine | -0.774 | -1.188 |
| acetate | -0.111 | 0.74 |
| glucAc | -0.069 | 0.429 |
| Rv0950ko | 1.291 | -0.175 |
| Rv1096ko | 1.782 | 0.947 |
| Rv3684ko | 1.615 | 0.029 |
| delta_otsA_trehalose | 0.044 | -0.101 |