Top 10 genes with highest correlation to Rv3139/fadE24:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3140/fadE23 | (cc=0.8226) | info on Rv3140/fadE23 |
| Rv2051c/ppm1 | (cc=0.6099) | info on Rv2051c/ppm1 |
| Rv2594c/ruvC | (cc=0.6078) | info on Rv2594c/ruvC |
| Rv1592c/- | (cc=0.5928) | info on Rv1592c/- |
| Rv3717/- | (cc=0.5882) | info on Rv3717/- |
| Rv2525c/- | (cc=0.5808) | info on Rv2525c/- |
| Rv0437c/psd | (cc=0.5773) | info on Rv0437c/psd |
| Rv2476c/gdh | (cc=0.5698) | info on Rv2476c/gdh |
| Rv0436c/pssA | (cc=0.545) | info on Rv0436c/pssA |
| Rv0994/moeA1 | (cc=0.5087) | info on Rv0994/moeA1 |
Correlation of Rv3139/fadE24 with Rv3140/fadE23
Normalized LFCs for Rv3139/fadE24:
(description and provenance of datasets)
| Rv3139/fadE24 | Rv3140/fadE23 | |
| Fe_supp_jason_reseq | 0.292 | -0.025 |
| low_pH_jason_reseq | -0.738 | -0.902 |
| NO_jason_reseq | -1.21 | -1.131 |
| B6_jason_reseq | -0.934 | -1.759 |
| MHCII_jason_reseq | -1.22 | -1.155 |
| Isoniazid02 | -0.604 | -1.085 |
| Rifampicin4 | -3.893 | -1.546 |
| Ethambutol3 | -2.126 | -1.961 |
| Meropenem3 | -3.097 | -2.268 |
| Vancomycin16 | -3.815 | -2.369 |
| Rv2680_day32 | -2.504 | -1.441 |
| H37Rv_KO_MarP | -1.547 | -1.833 |
| hypoxia_3wks | -0.77 | -0.969 |
| hypoxia_6wks | -0.054 | 0.152 |
| glycerol | -0.287 | -0.168 |
| cholesterol | -1.387 | -1.606 |
| AJ | -1.39 | -1.254 |
| Bibs02 | -0.758 | -1.4 |
| Bibs02c | -1.052 | -0.221 |
| BL6 | -0.629 | -0.132 |
| BL6a | -0.558 | 0.154 |
| BXD01 | -1.52 | -1.371 |
| BXD010 | -0.426 | 0.257 |
| BXD011 | -0.268 | -0.646 |
| BXD03 | -0.522 | 0.459 |
| BXD04 | -0.827 | -0.34 |
| BXD05 | -0.9 | -0.112 |
| BXD06 | -0.671 | -0.055 |
| BXD07 | -0.535 | -0.028 |
| BXD08 | -0.842 | -0.473 |
| BXD09 | -0.505 | 0.373 |
| CAST | -1.23 | -1.023 |
| CCcont | 0.979 | 1.183 |
| DS01 | -0.139 | 0.183 |
| DS02 | -0.309 | 0.473 |
| DS04 | -0.697 | -0.162 |
| DS0c | -0.357 | -0.09 |
| GP01 | -1.759 | -1.702 |
| GP02 | -1.4 | -1.351 |
| GP0c | -2.068 | -1.992 |
| NOD | 0.566 | -0.392 |
| NZO | -0.663 | -2.331 |
| PWK | -0.196 | -1.128 |
| H37Rv_KO_CtpC | -0.031 | -0.672 |
| H37Rv_KO_CtpD | 0.462 | -0.562 |
| H37Rv_KO_Rv1272 | -0.397 | 0.055 |
| H37Rv_KO_SugABC | -1.493 | -1.608 |
| H37Rv_KO_MbtN | -0.807 | -1.085 |
| Trans05 | -0.158 | -1.114 |
| macrophage_unactivated | -0.344 | -0.155 |
| IL1 | 0.228 | 0.0 |
| Rapamycin | -0.249 | 0.074 |
| Tcell | -0.544 | 0.078 |
| GMCSF | -1.31 | -1.64 |
| IFNab | 1.351 | 1.2 |
| IFNg | -0.949 | -1.376 |
| IFNg_GMCSF1 | -1.92 | -1.203 |
| Rv1432_day32 | -2.607 | -3.105 |
| Rv1565c_day32 | -0.965 | -1.271 |
| secA2_input | -0.086 | -0.982 |
| delta_Rv3594 | -2.521 | -3.431 |
| delta_Rv3717 | -2.81 | -3.559 |
| delta_Rv3811 | -2.06 | -3.066 |
| delta_Rv0954 | 1.925 | 0.866 |
| PonA1 | 0.822 | 0.26 |
| EccD1_KO | 0.303 | 0.71 |
| EspI_KO | 0.04 | 0.445 |
| PE35_KO | 0.079 | 0.42 |
| PPE68_KO | 0.0 | -0.09 |
| glycerol2 | -0.643 | -0.347 |
| lignocerate | -0.924 | -0.807 |
| oleate | -1.418 | -0.94 |
| phosphatidylcholine | -0.774 | -0.478 |
| acetate | -0.111 | 0.123 |
| glucAc | -0.069 | 0.076 |
| Rv0950ko | 1.291 | 1.333 |
| Rv1096ko | 1.782 | 1.227 |
| Rv3684ko | 1.615 | 0.845 |
| delta_otsA_trehalose | 0.044 | -0.512 |