Top 10 genes with highest correlation to Rv3135/PPE50:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136/PPE51 | (cc=0.8746) | info on Rv3136/PPE51 |
| Rv3136A/- | (cc=0.6146) | info on Rv3136A/- |
| Rv0270/fadD2 | (cc=0.4955) | info on Rv0270/fadD2 |
| Rv1626/- | (cc=0.4781) | info on Rv1626/- |
| Rv2081c/- | (cc=0.4616) | info on Rv2081c/- |
| Rv0221/- | (cc=0.4602) | info on Rv0221/- |
| Rv1344/mbtL | (cc=0.4572) | info on Rv1344/mbtL |
| Rv1374c/- | (cc=0.4549) | info on Rv1374c/- |
| Rv3395A/- | (cc=0.4461) | info on Rv3395A/- |
| Rv2627c/- | (cc=0.4455) | info on Rv2627c/- |
Correlation of Rv3135/PPE50 with Rv3136/PPE51
Normalized LFCs for Rv3135/PPE50:
(description and provenance of datasets)
| Rv3135/PPE50 | Rv3136/PPE51 | |
| Fe_supp_jason_reseq | 0.688 | 0.788 |
| low_pH_jason_reseq | 0.174 | 1.665 |
| NO_jason_reseq | 2.801 | 5.229 |
| B6_jason_reseq | 2.183 | 2.369 |
| MHCII_jason_reseq | 1.116 | -0.107 |
| Isoniazid02 | 3.336 | 3.293 |
| Rifampicin4 | -2.285 | -2.553 |
| Ethambutol3 | 1.802 | 2.291 |
| Meropenem3 | 3.717 | 4.831 |
| Vancomycin16 | -2.995 | -3.603 |
| Rv2680_day32 | 2.964 | 3.598 |
| H37Rv_KO_MarP | 1.094 | 2.015 |
| hypoxia_3wks | 0.562 | 0.291 |
| hypoxia_6wks | -1.061 | -1.274 |
| glycerol | -4.007 | -6.0 |
| cholesterol | -5.184 | -5.249 |
| AJ | -2.508 | -3.291 |
| Bibs02 | -1.37 | -0.709 |
| Bibs02c | -1.193 | -1.563 |
| BL6 | -3.041 | -3.241 |
| BL6a | -1.129 | -1.982 |
| BXD01 | -1.012 | -1.978 |
| BXD010 | -0.585 | -1.56 |
| BXD011 | -0.534 | -1.584 |
| BXD03 | -2.318 | -2.007 |
| BXD04 | 0.107 | -1.082 |
| BXD05 | -0.724 | -1.465 |
| BXD06 | -0.534 | -1.812 |
| BXD07 | -1.596 | -1.964 |
| BXD08 | -0.665 | -2.205 |
| BXD09 | -1.041 | -1.657 |
| CAST | -1.864 | -3.323 |
| CCcont | -1.868 | -1.715 |
| DS01 | -2.247 | -2.799 |
| DS02 | -0.487 | -1.367 |
| DS04 | -2.562 | -3.953 |
| DS0c | -1.138 | -2.53 |
| GP01 | -4.382 | -3.716 |
| GP02 | -3.217 | -2.866 |
| GP0c | -5.348 | -4.409 |
| NOD | -1.914 | -3.066 |
| NZO | -0.813 | -0.964 |
| PWK | -1.82 | -2.752 |
| H37Rv_KO_CtpC | -0.453 | -2.266 |
| H37Rv_KO_CtpD | 0.28 | 1.016 |
| H37Rv_KO_Rv1272 | -2.059 | -3.264 |
| H37Rv_KO_SugABC | -1.424 | -2.138 |
| H37Rv_KO_MbtN | -2.371 | -2.348 |
| Trans05 | -1.383 | -2.681 |
| macrophage_unactivated | -2.209 | -2.506 |
| IL1 | -0.715 | -2.705 |
| Rapamycin | -1.163 | -2.952 |
| Tcell | 1.137 | 0.596 |
| GMCSF | -0.853 | -0.842 |
| IFNab | -1.769 | -3.939 |
| IFNg | 0.623 | -0.682 |
| IFNg_GMCSF1 | -0.217 | 0.314 |
| Rv1432_day32 | 2.57 | 1.261 |
| Rv1565c_day32 | -2.088 | -2.756 |
| secA2_input | -1.736 | 1.016 |
| delta_Rv3594 | -1.065 | -1.704 |
| delta_Rv3717 | -1.501 | -1.606 |
| delta_Rv3811 | -1.205 | -2.014 |
| delta_Rv0954 | -1.047 | -0.578 |
| PonA1 | -1.091 | -1.084 |
| EccD1_KO | -2.937 | -2.717 |
| EspI_KO | -2.033 | -2.972 |
| PE35_KO | -1.61 | -1.721 |
| PPE68_KO | -1.465 | -0.989 |
| glycerol2 | 1.188 | 1.163 |
| lignocerate | -1.594 | -0.32 |
| oleate | 1.752 | 4.059 |
| phosphatidylcholine | 0.045 | 1.664 |
| acetate | -0.72 | 0.69 |
| glucAc | -1.299 | 0.366 |
| Rv0950ko | 0.024 | 0.721 |
| Rv1096ko | -1.342 | -0.745 |
| Rv3684ko | 0.671 | 0.596 |
| delta_otsA_trehalose | -2.409 | 0.277 |