Top 10 genes with highest correlation to Rv3135/PPE50:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136/PPE51 | (cc=0.8746) | info on Rv3136/PPE51 |
| Rv3136A/- | (cc=0.6146) | info on Rv3136A/- |
| Rv0270/fadD2 | (cc=0.4955) | info on Rv0270/fadD2 |
| Rv1626/- | (cc=0.4781) | info on Rv1626/- |
| Rv2081c/- | (cc=0.4616) | info on Rv2081c/- |
| Rv0221/- | (cc=0.4602) | info on Rv0221/- |
| Rv1344/mbtL | (cc=0.4572) | info on Rv1344/mbtL |
| Rv1374c/- | (cc=0.4549) | info on Rv1374c/- |
| Rv3395A/- | (cc=0.4461) | info on Rv3395A/- |
| Rv2627c/- | (cc=0.4455) | info on Rv2627c/- |
Correlation of Rv3135/PPE50 with Rv1626/-
Normalized LFCs for Rv3135/PPE50:
(description and provenance of datasets)
| Rv3135/PPE50 | Rv1626/- | |
| Fe_supp_jason_reseq | 0.688 | 2.876 |
| low_pH_jason_reseq | 0.174 | 4.067 |
| NO_jason_reseq | 2.801 | 1.609 |
| B6_jason_reseq | 2.183 | 1.895 |
| MHCII_jason_reseq | 1.116 | -2.872 |
| Isoniazid02 | 3.336 | 4.119 |
| Rifampicin4 | -2.285 | -3.097 |
| Ethambutol3 | 1.802 | 1.474 |
| Meropenem3 | 3.717 | 6.0 |
| Vancomycin16 | -2.995 | -3.125 |
| Rv2680_day32 | 2.964 | -0.717 |
| H37Rv_KO_MarP | 1.094 | -1.476 |
| hypoxia_3wks | 0.562 | -4.717 |
| hypoxia_6wks | -1.061 | -4.825 |
| glycerol | -4.007 | 1.24 |
| cholesterol | -5.184 | -4.059 |
| AJ | -2.508 | -0.706 |
| Bibs02 | -1.37 | -3.592 |
| Bibs02c | -1.193 | -3.577 |
| BL6 | -3.041 | -3.611 |
| BL6a | -1.129 | -1.617 |
| BXD01 | -1.012 | 0.254 |
| BXD010 | -0.585 | -0.289 |
| BXD011 | -0.534 | -0.668 |
| BXD03 | -2.318 | -0.614 |
| BXD04 | 0.107 | 1.571 |
| BXD05 | -0.724 | -1.067 |
| BXD06 | -0.534 | 0.267 |
| BXD07 | -1.596 | -0.452 |
| BXD08 | -0.665 | 1.253 |
| BXD09 | -1.041 | 0.293 |
| CAST | -1.864 | -1.028 |
| CCcont | -1.868 | -1.033 |
| DS01 | -2.247 | -2.197 |
| DS02 | -0.487 | -1.327 |
| DS04 | -2.562 | -3.159 |
| DS0c | -1.138 | -2.329 |
| GP01 | -4.382 | -3.038 |
| GP02 | -3.217 | -2.56 |
| GP0c | -5.348 | -4.001 |
| NOD | -1.914 | -0.89 |
| NZO | -0.813 | 0.896 |
| PWK | -1.82 | -0.611 |
| H37Rv_KO_CtpC | -0.453 | -0.852 |
| H37Rv_KO_CtpD | 0.28 | -1.112 |
| H37Rv_KO_Rv1272 | -2.059 | -2.989 |
| H37Rv_KO_SugABC | -1.424 | -2.776 |
| H37Rv_KO_MbtN | -2.371 | -1.335 |
| Trans05 | -1.383 | -2.883 |
| macrophage_unactivated | -2.209 | -1.146 |
| IL1 | -0.715 | -4.043 |
| Rapamycin | -1.163 | -4.864 |
| Tcell | 1.137 | 1.352 |
| GMCSF | -0.853 | -0.333 |
| IFNab | -1.769 | -1.769 |
| IFNg | 0.623 | -2.464 |
| IFNg_GMCSF1 | -0.217 | 2.083 |
| Rv1432_day32 | 2.57 | 1.411 |
| Rv1565c_day32 | -2.088 | 0.0 |
| secA2_input | -1.736 | 0.645 |
| delta_Rv3594 | -1.065 | -5.025 |
| delta_Rv3717 | -1.501 | -3.666 |
| delta_Rv3811 | -1.205 | -4.571 |
| delta_Rv0954 | -1.047 | -3.008 |
| PonA1 | -1.091 | -2.006 |
| EccD1_KO | -2.937 | -0.24 |
| EspI_KO | -2.033 | -0.653 |
| PE35_KO | -1.61 | 0.201 |
| PPE68_KO | -1.465 | 1.293 |
| glycerol2 | 1.188 | -2.83 |
| lignocerate | -1.594 | -4.71 |
| oleate | 1.752 | -0.384 |
| phosphatidylcholine | 0.045 | -3.109 |
| acetate | -0.72 | -1.383 |
| glucAc | -1.299 | -1.649 |
| Rv0950ko | 0.024 | 0.308 |
| Rv1096ko | -1.342 | -3.893 |
| Rv3684ko | 0.671 | 0.429 |
| delta_otsA_trehalose | -2.409 | 1.159 |