Top 10 genes with highest correlation to Rv3135/PPE50:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3136/PPE51 | (cc=0.8746) | info on Rv3136/PPE51 |
| Rv3136A/- | (cc=0.6146) | info on Rv3136A/- |
| Rv0270/fadD2 | (cc=0.4955) | info on Rv0270/fadD2 |
| Rv1626/- | (cc=0.4781) | info on Rv1626/- |
| Rv2081c/- | (cc=0.4616) | info on Rv2081c/- |
| Rv0221/- | (cc=0.4602) | info on Rv0221/- |
| Rv1344/mbtL | (cc=0.4572) | info on Rv1344/mbtL |
| Rv1374c/- | (cc=0.4549) | info on Rv1374c/- |
| Rv3395A/- | (cc=0.4461) | info on Rv3395A/- |
| Rv2627c/- | (cc=0.4455) | info on Rv2627c/- |
Correlation of Rv3135/PPE50 with Rv2081c/-
Normalized LFCs for Rv3135/PPE50:
(description and provenance of datasets)
| Rv3135/PPE50 | Rv2081c/- | |
| Fe_supp_jason_reseq | 0.688 | 0.319 |
| low_pH_jason_reseq | 0.174 | -0.679 |
| NO_jason_reseq | 2.801 | -0.087 |
| B6_jason_reseq | 2.183 | 0.929 |
| MHCII_jason_reseq | 1.116 | 0.86 |
| Isoniazid02 | 3.336 | 0.949 |
| Rifampicin4 | -2.285 | 1.121 |
| Ethambutol3 | 1.802 | 1.237 |
| Meropenem3 | 3.717 | 1.001 |
| Vancomycin16 | -2.995 | 0.533 |
| Rv2680_day32 | 2.964 | -0.235 |
| H37Rv_KO_MarP | 1.094 | -0.093 |
| hypoxia_3wks | 0.562 | -0.387 |
| hypoxia_6wks | -1.061 | -0.384 |
| glycerol | -4.007 | -2.556 |
| cholesterol | -5.184 | -1.67 |
| AJ | -2.508 | 0.21 |
| Bibs02 | -1.37 | -0.593 |
| Bibs02c | -1.193 | 0.062 |
| BL6 | -3.041 | -0.689 |
| BL6a | -1.129 | -0.208 |
| BXD01 | -1.012 | -0.625 |
| BXD010 | -0.585 | -0.603 |
| BXD011 | -0.534 | -0.309 |
| BXD03 | -2.318 | -0.608 |
| BXD04 | 0.107 | -0.108 |
| BXD05 | -0.724 | -1.33 |
| BXD06 | -0.534 | -0.675 |
| BXD07 | -1.596 | -0.369 |
| BXD08 | -0.665 | -0.661 |
| BXD09 | -1.041 | -0.987 |
| CAST | -1.864 | -0.155 |
| CCcont | -1.868 | -1.476 |
| DS01 | -2.247 | -0.277 |
| DS02 | -0.487 | -0.268 |
| DS04 | -2.562 | -0.086 |
| DS0c | -1.138 | 0.207 |
| GP01 | -4.382 | -1.334 |
| GP02 | -3.217 | -0.199 |
| GP0c | -5.348 | -1.543 |
| NOD | -1.914 | 0.54 |
| NZO | -0.813 | -0.582 |
| PWK | -1.82 | -0.109 |
| H37Rv_KO_CtpC | -0.453 | -0.226 |
| H37Rv_KO_CtpD | 0.28 | -0.425 |
| H37Rv_KO_Rv1272 | -2.059 | 0.06 |
| H37Rv_KO_SugABC | -1.424 | 0.005 |
| H37Rv_KO_MbtN | -2.371 | -0.134 |
| Trans05 | -1.383 | 0.994 |
| macrophage_unactivated | -2.209 | -1.572 |
| IL1 | -0.715 | -0.549 |
| Rapamycin | -1.163 | -0.779 |
| Tcell | 1.137 | -0.886 |
| GMCSF | -0.853 | -0.119 |
| IFNab | -1.769 | -1.527 |
| IFNg | 0.623 | -0.925 |
| IFNg_GMCSF1 | -0.217 | -0.493 |
| Rv1432_day32 | 2.57 | -0.259 |
| Rv1565c_day32 | -2.088 | 0.583 |
| secA2_input | -1.736 | -0.263 |
| delta_Rv3594 | -1.065 | 0.054 |
| delta_Rv3717 | -1.501 | -0.359 |
| delta_Rv3811 | -1.205 | -0.046 |
| delta_Rv0954 | -1.047 | 0.039 |
| PonA1 | -1.091 | -0.222 |
| EccD1_KO | -2.937 | -0.062 |
| EspI_KO | -2.033 | -0.491 |
| PE35_KO | -1.61 | 0.134 |
| PPE68_KO | -1.465 | -0.291 |
| glycerol2 | 1.188 | -0.018 |
| lignocerate | -1.594 | -0.756 |
| oleate | 1.752 | 0.621 |
| phosphatidylcholine | 0.045 | 0.132 |
| acetate | -0.72 | -0.359 |
| glucAc | -1.299 | -0.467 |
| Rv0950ko | 0.024 | 0.841 |
| Rv1096ko | -1.342 | 0.172 |
| Rv3684ko | 0.671 | 0.632 |
| delta_otsA_trehalose | -2.409 | -0.027 |