Top 10 genes with highest correlation to Rv3106/fprA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0656c/vapC6 | (cc=0.4593) | info on Rv0656c/vapC6 |
| Rv1842c/- | (cc=0.426) | info on Rv1842c/- |
| Rv1184c/- | (cc=0.4095) | info on Rv1184c/- |
| Rv3414c/sigD | (cc=0.4039) | info on Rv3414c/sigD |
| Rv2609c/- | (cc=0.3983) | info on Rv2609c/- |
| Rv1228/lpqX | (cc=0.3981) | info on Rv1228/lpqX |
| Rv0464c/- | (cc=0.3919) | info on Rv0464c/- |
| Rv3535c/hsaG | (cc=0.3864) | info on Rv3535c/hsaG |
| Rv1495/mazF4 | (cc=0.382) | info on Rv1495/mazF4 |
| Rv2524c/fas | (cc=0.3785) | info on Rv2524c/fas |
Correlation of Rv3106/fprA with Rv2524c/fas
Normalized LFCs for Rv3106/fprA:
(description and provenance of datasets)
| Rv3106/fprA | Rv2524c/fas | |
| Fe_supp_jason_reseq | 0.137 | 0.218 |
| low_pH_jason_reseq | -0.597 | 0.0 |
| NO_jason_reseq | 0.042 | 0.0 |
| B6_jason_reseq | 0.053 | 0.0 |
| MHCII_jason_reseq | 0.456 | 0.0 |
| Isoniazid02 | -0.033 | -0.201 |
| Rifampicin4 | -0.704 | -0.374 |
| Ethambutol3 | 2.056 | 1.701 |
| Meropenem3 | -0.437 | -0.165 |
| Vancomycin16 | 0.0 | -0.366 |
| Rv2680_day32 | 0.238 | 0.0 |
| H37Rv_KO_MarP | 0.336 | 1.51 |
| hypoxia_3wks | 0.319 | 0.0 |
| hypoxia_6wks | 0.754 | -0.209 |
| glycerol | 0.124 | 0.0 |
| cholesterol | 0.672 | 0.0 |
| AJ | 0.269 | 0.0 |
| Bibs02 | 0.253 | 0.0 |
| Bibs02c | 0.297 | 0.0 |
| BL6 | -0.206 | 0.0 |
| BL6a | -0.202 | 0.0 |
| BXD01 | -0.028 | 0.0 |
| BXD010 | -0.269 | 0.0 |
| BXD011 | 0.245 | 0.0 |
| BXD03 | -0.018 | 0.0 |
| BXD04 | 0.041 | 0.0 |
| BXD05 | -0.182 | 0.0 |
| BXD06 | -0.641 | 0.0 |
| BXD07 | -0.277 | 0.0 |
| BXD08 | -0.219 | 0.0 |
| BXD09 | -0.506 | 0.0 |
| CAST | -0.776 | 0.0 |
| CCcont | -0.321 | 0.633 |
| DS01 | -0.522 | 0.236 |
| DS02 | -0.172 | 0.0 |
| DS04 | 0.008 | 0.0 |
| DS0c | -0.583 | 0.596 |
| GP01 | 0.436 | 0.0 |
| GP02 | -0.31 | 0.0 |
| GP0c | -0.557 | 0.0 |
| NOD | -1.064 | 0.0 |
| NZO | 0.171 | 0.0 |
| PWK | -0.102 | 0.0 |
| H37Rv_KO_CtpC | -1.013 | 0.0 |
| H37Rv_KO_CtpD | 0.367 | 0.0 |
| H37Rv_KO_Rv1272 | -0.542 | 0.0 |
| H37Rv_KO_SugABC | 1.292 | 0.0 |
| H37Rv_KO_MbtN | -0.552 | 0.103 |
| Trans05 | -0.417 | 0.0 |
| macrophage_unactivated | -0.265 | 0.0 |
| IL1 | 0.258 | -0.409 |
| Rapamycin | 1.16 | 0.0 |
| Tcell | -0.417 | -0.45 |
| GMCSF | -0.581 | -0.364 |
| IFNab | 0.726 | 0.381 |
| IFNg | 0.294 | -0.369 |
| IFNg_GMCSF1 | -0.264 | -0.434 |
| Rv1432_day32 | -0.763 | 0.0 |
| Rv1565c_day32 | 0.047 | 0.0 |
| secA2_input | 0.113 | 0.136 |
| delta_Rv3594 | 0.616 | 1.037 |
| delta_Rv3717 | 0.541 | 1.432 |
| delta_Rv3811 | 0.257 | 0.87 |
| delta_Rv0954 | 0.46 | 0.178 |
| PonA1 | 1.075 | 0.437 |
| EccD1_KO | -0.128 | -1.121 |
| EspI_KO | -0.722 | -0.707 |
| PE35_KO | -0.172 | -0.228 |
| PPE68_KO | 0.0 | -0.25 |
| glycerol2 | 0.287 | 0.369 |
| lignocerate | -0.457 | 0.168 |
| oleate | -0.509 | 0.0 |
| phosphatidylcholine | -0.017 | 0.679 |
| acetate | 1.416 | 0.0 |
| glucAc | 0.734 | 0.143 |
| Rv0950ko | -0.582 | -1.764 |
| Rv1096ko | -0.389 | -1.463 |
| Rv3684ko | -0.164 | -1.588 |
| delta_otsA_trehalose | 0.78 | -0.133 |