Top 10 genes with highest correlation to Rv3106/fprA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0656c/vapC6 | (cc=0.4593) | info on Rv0656c/vapC6 |
| Rv1842c/- | (cc=0.426) | info on Rv1842c/- |
| Rv1184c/- | (cc=0.4095) | info on Rv1184c/- |
| Rv3414c/sigD | (cc=0.4039) | info on Rv3414c/sigD |
| Rv2609c/- | (cc=0.3983) | info on Rv2609c/- |
| Rv1228/lpqX | (cc=0.3981) | info on Rv1228/lpqX |
| Rv0464c/- | (cc=0.3919) | info on Rv0464c/- |
| Rv3535c/hsaG | (cc=0.3864) | info on Rv3535c/hsaG |
| Rv1495/mazF4 | (cc=0.382) | info on Rv1495/mazF4 |
| Rv2524c/fas | (cc=0.3785) | info on Rv2524c/fas |
Correlation of Rv3106/fprA with Rv1184c/-
Normalized LFCs for Rv3106/fprA:
(description and provenance of datasets)
| Rv3106/fprA | Rv1184c/- | |
| Fe_supp_jason_reseq | 0.137 | 1.708 |
| low_pH_jason_reseq | -0.597 | -0.694 |
| NO_jason_reseq | 0.042 | -0.399 |
| B6_jason_reseq | 0.053 | 1.187 |
| MHCII_jason_reseq | 0.456 | 1.676 |
| Isoniazid02 | -0.033 | -0.202 |
| Rifampicin4 | -0.704 | -1.335 |
| Ethambutol3 | 2.056 | -0.734 |
| Meropenem3 | -0.437 | -0.83 |
| Vancomycin16 | 0.0 | -0.316 |
| Rv2680_day32 | 0.238 | 0.241 |
| H37Rv_KO_MarP | 0.336 | 0.185 |
| hypoxia_3wks | 0.319 | 0.223 |
| hypoxia_6wks | 0.754 | -0.265 |
| glycerol | 0.124 | -0.443 |
| cholesterol | 0.672 | -0.372 |
| AJ | 0.269 | -0.953 |
| Bibs02 | 0.253 | -0.114 |
| Bibs02c | 0.297 | -0.62 |
| BL6 | -0.206 | -1.109 |
| BL6a | -0.202 | -1.478 |
| BXD01 | -0.028 | -2.236 |
| BXD010 | -0.269 | -1.344 |
| BXD011 | 0.245 | -1.279 |
| BXD03 | -0.018 | -1.588 |
| BXD04 | 0.041 | -1.554 |
| BXD05 | -0.182 | -0.796 |
| BXD06 | -0.641 | -1.975 |
| BXD07 | -0.277 | -1.52 |
| BXD08 | -0.219 | -1.833 |
| BXD09 | -0.506 | -1.349 |
| CAST | -0.776 | -1.8 |
| CCcont | -0.321 | -0.784 |
| DS01 | -0.522 | -0.443 |
| DS02 | -0.172 | -0.057 |
| DS04 | 0.008 | -0.898 |
| DS0c | -0.583 | 0.162 |
| GP01 | 0.436 | -1.674 |
| GP02 | -0.31 | -1.879 |
| GP0c | -0.557 | -2.176 |
| NOD | -1.064 | -0.771 |
| NZO | 0.171 | -1.12 |
| PWK | -0.102 | -1.189 |
| H37Rv_KO_CtpC | -1.013 | -1.612 |
| H37Rv_KO_CtpD | 0.367 | -1.315 |
| H37Rv_KO_Rv1272 | -0.542 | -1.713 |
| H37Rv_KO_SugABC | 1.292 | -1.303 |
| H37Rv_KO_MbtN | -0.552 | -0.742 |
| Trans05 | -0.417 | -0.537 |
| macrophage_unactivated | -0.265 | -1.654 |
| IL1 | 0.258 | 1.584 |
| Rapamycin | 1.16 | 0.822 |
| Tcell | -0.417 | -1.978 |
| GMCSF | -0.581 | -0.293 |
| IFNab | 0.726 | 0.698 |
| IFNg | 0.294 | -0.297 |
| IFNg_GMCSF1 | -0.264 | 0.097 |
| Rv1432_day32 | -0.763 | -1.902 |
| Rv1565c_day32 | 0.047 | 0.212 |
| secA2_input | 0.113 | -0.603 |
| delta_Rv3594 | 0.616 | 0.724 |
| delta_Rv3717 | 0.541 | 0.131 |
| delta_Rv3811 | 0.257 | -0.462 |
| delta_Rv0954 | 0.46 | 0.487 |
| PonA1 | 1.075 | 0.634 |
| EccD1_KO | -0.128 | -2.424 |
| EspI_KO | -0.722 | -0.516 |
| PE35_KO | -0.172 | -1.502 |
| PPE68_KO | 0.0 | -1.245 |
| glycerol2 | 0.287 | 0.247 |
| lignocerate | -0.457 | 0.485 |
| oleate | -0.509 | -1.168 |
| phosphatidylcholine | -0.017 | -0.511 |
| acetate | 1.416 | 0.389 |
| glucAc | 0.734 | 0.035 |
| Rv0950ko | -0.582 | -0.196 |
| Rv1096ko | -0.389 | 0.401 |
| Rv3684ko | -0.164 | -0.573 |
| delta_otsA_trehalose | 0.78 | 0.206 |