Top 10 genes with highest correlation to Rv3096/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3005c/- | (cc=0.5591) | info on Rv3005c/- |
| Rv0994/moeA1 | (cc=0.5581) | info on Rv0994/moeA1 |
| Rv1838c/vapC13 | (cc=0.5437) | info on Rv1838c/vapC13 |
| Rv0789c/- | (cc=0.5281) | info on Rv0789c/- |
| Rv1860/apa | (cc=0.5168) | info on Rv1860/apa |
| Rv3536c/hsaE | (cc=0.5094) | info on Rv3536c/hsaE |
| Rv3717/- | (cc=0.5064) | info on Rv3717/- |
| Rv0963c/- | (cc=0.5013) | info on Rv0963c/- |
| Rv0436c/pssA | (cc=0.4932) | info on Rv0436c/pssA |
| Rv0995/rimJ | (cc=0.4874) | info on Rv0995/rimJ |
Correlation of Rv3096/- with Rv0995/rimJ
Normalized LFCs for Rv3096/-:
(description and provenance of datasets)
| Rv3096/- | Rv0995/rimJ | |
| Fe_supp_jason_reseq | 0.136 | -0.153 |
| low_pH_jason_reseq | -0.211 | -2.916 |
| NO_jason_reseq | -0.677 | -1.205 |
| B6_jason_reseq | -0.203 | -0.085 |
| MHCII_jason_reseq | -0.252 | 0.516 |
| Isoniazid02 | -0.29 | -3.312 |
| Rifampicin4 | -1.332 | -4.318 |
| Ethambutol3 | -0.247 | -2.203 |
| Meropenem3 | 0.0 | -4.081 |
| Vancomycin16 | -1.082 | -5.515 |
| Rv2680_day32 | -0.655 | 0.564 |
| H37Rv_KO_MarP | -0.658 | 2.697 |
| hypoxia_3wks | -0.794 | -1.683 |
| hypoxia_6wks | 0.129 | -2.322 |
| glycerol | 0.089 | 1.712 |
| cholesterol | 0.173 | 0.212 |
| AJ | -0.151 | 0.528 |
| Bibs02 | 0.955 | -0.909 |
| Bibs02c | 0.267 | -0.671 |
| BL6 | -0.275 | -1.044 |
| BL6a | 0.194 | -2.444 |
| BXD01 | -0.671 | -2.009 |
| BXD010 | -0.366 | -0.323 |
| BXD011 | -0.491 | -2.143 |
| BXD03 | -0.359 | -0.672 |
| BXD04 | 0.047 | -1.948 |
| BXD05 | -0.53 | -2.668 |
| BXD06 | -0.655 | -1.975 |
| BXD07 | -0.235 | -1.549 |
| BXD08 | -0.202 | -2.096 |
| BXD09 | -0.309 | -1.635 |
| CAST | -0.39 | 0.085 |
| CCcont | -0.222 | 0.842 |
| DS01 | 0.275 | 0.186 |
| DS02 | 0.019 | 1.038 |
| DS04 | 0.589 | -0.229 |
| DS0c | 0.357 | 1.651 |
| GP01 | -0.189 | 0.254 |
| GP02 | -0.492 | -1.134 |
| GP0c | -0.326 | -1.454 |
| NOD | 0.62 | 2.756 |
| NZO | 0.184 | -0.288 |
| PWK | -0.462 | -0.861 |
| H37Rv_KO_CtpC | 0.414 | 0.562 |
| H37Rv_KO_CtpD | 0.494 | -0.513 |
| H37Rv_KO_Rv1272 | 0.261 | -1.962 |
| H37Rv_KO_SugABC | 1.089 | -0.204 |
| H37Rv_KO_MbtN | -0.411 | -1.994 |
| Trans05 | 0.759 | -1.434 |
| macrophage_unactivated | 0.158 | -0.464 |
| IL1 | 0.012 | -2.21 |
| Rapamycin | -0.298 | -2.286 |
| Tcell | -0.241 | -2.18 |
| GMCSF | 0.475 | -3.028 |
| IFNab | -0.012 | -3.625 |
| IFNg | -0.433 | -2.55 |
| IFNg_GMCSF1 | 0.145 | -0.71 |
| Rv1432_day32 | -0.116 | -0.139 |
| Rv1565c_day32 | -0.103 | 2.685 |
| secA2_input | 0.2 | -0.049 |
| delta_Rv3594 | -0.015 | -0.364 |
| delta_Rv3717 | -0.422 | -1.807 |
| delta_Rv3811 | -0.097 | 0.135 |
| delta_Rv0954 | 0.483 | 1.467 |
| PonA1 | 0.093 | 0.651 |
| EccD1_KO | 0.276 | -1.246 |
| EspI_KO | 0.616 | 0.724 |
| PE35_KO | 0.233 | 0.423 |
| PPE68_KO | 0.214 | -1.961 |
| glycerol2 | 0.513 | 0.383 |
| lignocerate | 1.287 | 3.231 |
| oleate | 0.234 | -1.934 |
| phosphatidylcholine | 0.654 | 2.522 |
| acetate | 0.494 | 1.82 |
| glucAc | 0.876 | 1.876 |
| Rv0950ko | 0.25 | -0.1 |
| Rv1096ko | 0.35 | 0.464 |
| Rv3684ko | 0.259 | 1.251 |
| delta_otsA_trehalose | -0.241 | -0.788 |