Top 10 genes with highest correlation to Rv3096/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3005c/- | (cc=0.5591) | info on Rv3005c/- |
| Rv0994/moeA1 | (cc=0.5581) | info on Rv0994/moeA1 |
| Rv1838c/vapC13 | (cc=0.5437) | info on Rv1838c/vapC13 |
| Rv0789c/- | (cc=0.5281) | info on Rv0789c/- |
| Rv1860/apa | (cc=0.5168) | info on Rv1860/apa |
| Rv3536c/hsaE | (cc=0.5094) | info on Rv3536c/hsaE |
| Rv3717/- | (cc=0.5064) | info on Rv3717/- |
| Rv0963c/- | (cc=0.5013) | info on Rv0963c/- |
| Rv0436c/pssA | (cc=0.4932) | info on Rv0436c/pssA |
| Rv0995/rimJ | (cc=0.4874) | info on Rv0995/rimJ |
Correlation of Rv3096/- with Rv0994/moeA1
Normalized LFCs for Rv3096/-:
(description and provenance of datasets)
| Rv3096/- | Rv0994/moeA1 | |
| Fe_supp_jason_reseq | 0.136 | -0.559 |
| low_pH_jason_reseq | -0.211 | -4.603 |
| NO_jason_reseq | -0.677 | -2.371 |
| B6_jason_reseq | -0.203 | -3.282 |
| MHCII_jason_reseq | -0.252 | -1.968 |
| Isoniazid02 | -0.29 | 1.762 |
| Rifampicin4 | -1.332 | -6.0 |
| Ethambutol3 | -0.247 | -0.683 |
| Meropenem3 | 0.0 | -3.435 |
| Vancomycin16 | -1.082 | -6.0 |
| Rv2680_day32 | -0.655 | -2.48 |
| H37Rv_KO_MarP | -0.658 | -4.936 |
| hypoxia_3wks | -0.794 | -3.537 |
| hypoxia_6wks | 0.129 | -4.475 |
| glycerol | 0.089 | 0.635 |
| cholesterol | 0.173 | 2.24 |
| AJ | -0.151 | -3.387 |
| Bibs02 | 0.955 | 0.701 |
| Bibs02c | 0.267 | 0.771 |
| BL6 | -0.275 | -1.158 |
| BL6a | 0.194 | -1.995 |
| BXD01 | -0.671 | -2.963 |
| BXD010 | -0.366 | -2.049 |
| BXD011 | -0.491 | -2.485 |
| BXD03 | -0.359 | -2.38 |
| BXD04 | 0.047 | -2.412 |
| BXD05 | -0.53 | -2.625 |
| BXD06 | -0.655 | -1.272 |
| BXD07 | -0.235 | -3.024 |
| BXD08 | -0.202 | -2.42 |
| BXD09 | -0.309 | -2.741 |
| CAST | -0.39 | -3.684 |
| CCcont | -0.222 | 0.079 |
| DS01 | 0.275 | 0.587 |
| DS02 | 0.019 | 0.665 |
| DS04 | 0.589 | -0.245 |
| DS0c | 0.357 | 0.024 |
| GP01 | -0.189 | -1.998 |
| GP02 | -0.492 | -1.817 |
| GP0c | -0.326 | -2.631 |
| NOD | 0.62 | -2.262 |
| NZO | 0.184 | -3.891 |
| PWK | -0.462 | -3.342 |
| H37Rv_KO_CtpC | 0.414 | -0.437 |
| H37Rv_KO_CtpD | 0.494 | 0.612 |
| H37Rv_KO_Rv1272 | 0.261 | -2.656 |
| H37Rv_KO_SugABC | 1.089 | -1.744 |
| H37Rv_KO_MbtN | -0.411 | -0.399 |
| Trans05 | 0.759 | -1.797 |
| macrophage_unactivated | 0.158 | -0.303 |
| IL1 | 0.012 | -1.186 |
| Rapamycin | -0.298 | -0.779 |
| Tcell | -0.241 | -1.404 |
| GMCSF | 0.475 | -0.895 |
| IFNab | -0.012 | -0.218 |
| IFNg | -0.433 | -2.205 |
| IFNg_GMCSF1 | 0.145 | -2.341 |
| Rv1432_day32 | -0.116 | -3.139 |
| Rv1565c_day32 | -0.103 | -2.019 |
| secA2_input | 0.2 | 0.374 |
| delta_Rv3594 | -0.015 | -1.366 |
| delta_Rv3717 | -0.422 | -0.999 |
| delta_Rv3811 | -0.097 | -0.674 |
| delta_Rv0954 | 0.483 | -0.508 |
| PonA1 | 0.093 | -0.454 |
| EccD1_KO | 0.276 | 0.776 |
| EspI_KO | 0.616 | 0.436 |
| PE35_KO | 0.233 | 0.977 |
| PPE68_KO | 0.214 | 0.79 |
| glycerol2 | 0.513 | 0.914 |
| lignocerate | 1.287 | -0.424 |
| oleate | 0.234 | -0.315 |
| phosphatidylcholine | 0.654 | -0.679 |
| acetate | 0.494 | -0.178 |
| glucAc | 0.876 | -0.229 |
| Rv0950ko | 0.25 | 0.377 |
| Rv1096ko | 0.35 | 0.666 |
| Rv3684ko | 0.259 | -0.144 |
| delta_otsA_trehalose | -0.241 | 0.368 |