Top 10 genes with highest correlation to Rv3072c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0104/- | (cc=0.6111) | info on Rv0104/- |
| Rv1971/mce3F | (cc=0.6028) | info on Rv1971/mce3F |
| Rv3086/adhD | (cc=0.6009) | info on Rv3086/adhD |
| Rv2208/cobS | (cc=0.5119) | info on Rv2208/cobS |
| Rv1774/- | (cc=0.5039) | info on Rv1774/- |
| Rv2638/- | (cc=0.5021) | info on Rv2638/- |
| Rv0008c/- | (cc=0.4975) | info on Rv0008c/- |
| Rv3353c/- | (cc=0.4967) | info on Rv3353c/- |
| Rv0254c/cobU | (cc=0.4951) | info on Rv0254c/cobU |
| Rv2622/- | (cc=0.4889) | info on Rv2622/- |
Correlation of Rv3072c/- with Rv3353c/-
Normalized LFCs for Rv3072c/-:
(description and provenance of datasets)
| Rv3072c/- | Rv3353c/- | |
| Fe_supp_jason_reseq | 0.183 | -0.717 |
| low_pH_jason_reseq | 0.299 | -0.11 |
| NO_jason_reseq | -0.05 | -0.278 |
| B6_jason_reseq | -0.809 | 0.221 |
| MHCII_jason_reseq | -0.83 | 1.201 |
| Isoniazid02 | -2.282 | -0.202 |
| Rifampicin4 | 0.409 | -0.376 |
| Ethambutol3 | -1.577 | -0.405 |
| Meropenem3 | -0.836 | -0.026 |
| Vancomycin16 | -0.881 | 0.172 |
| Rv2680_day32 | -0.339 | -1.07 |
| H37Rv_KO_MarP | 0.09 | 0.638 |
| hypoxia_3wks | -0.339 | -0.478 |
| hypoxia_6wks | -0.238 | -1.063 |
| glycerol | -0.967 | 0.846 |
| cholesterol | -0.91 | 0.675 |
| AJ | 0.523 | 0.62 |
| Bibs02 | 0.166 | 0.603 |
| Bibs02c | -1.679 | -0.582 |
| BL6 | -0.064 | -0.568 |
| BL6a | -1.29 | -0.494 |
| BXD01 | -0.397 | -1.238 |
| BXD010 | -1.046 | -2.853 |
| BXD011 | -0.715 | -0.857 |
| BXD03 | -1.325 | -0.144 |
| BXD04 | 0.0 | -1.562 |
| BXD05 | -0.355 | -1.466 |
| BXD06 | -0.32 | -1.137 |
| BXD07 | -1.335 | -1.715 |
| BXD08 | -0.169 | -1.122 |
| BXD09 | -0.092 | -1.577 |
| CAST | -0.118 | 0.127 |
| CCcont | -0.189 | -0.098 |
| DS01 | 0.044 | -0.137 |
| DS02 | 0.424 | -0.471 |
| DS04 | 0.242 | 0.793 |
| DS0c | -0.435 | -0.572 |
| GP01 | 0.309 | -0.708 |
| GP02 | 0.5 | 0.932 |
| GP0c | 0.942 | -2.083 |
| NOD | -0.503 | 0.848 |
| NZO | -0.24 | 0.533 |
| PWK | -0.013 | 0.443 |
| H37Rv_KO_CtpC | 0.857 | 0.684 |
| H37Rv_KO_CtpD | 1.134 | 0.211 |
| H37Rv_KO_Rv1272 | -0.704 | -0.093 |
| H37Rv_KO_SugABC | -0.987 | -2.271 |
| H37Rv_KO_MbtN | -0.962 | -1.938 |
| Trans05 | 0.016 | -0.616 |
| macrophage_unactivated | 0.379 | -1.218 |
| IL1 | -1.023 | -3.1 |
| Rapamycin | -0.718 | -1.553 |
| Tcell | -1.365 | -1.548 |
| GMCSF | -0.248 | -1.45 |
| IFNab | -0.828 | -3.205 |
| IFNg | -0.66 | -4.196 |
| IFNg_GMCSF1 | -0.035 | -0.591 |
| Rv1432_day32 | 1.352 | 0.0 |
| Rv1565c_day32 | -0.916 | -0.504 |
| secA2_input | -0.404 | -0.712 |
| delta_Rv3594 | 0.754 | -0.595 |
| delta_Rv3717 | 0.351 | 0.132 |
| delta_Rv3811 | 0.733 | 0.8 |
| delta_Rv0954 | 0.448 | 1.271 |
| PonA1 | 0.648 | 1.024 |
| EccD1_KO | -0.671 | 0.358 |
| EspI_KO | -1.406 | -0.471 |
| PE35_KO | -0.98 | -0.866 |
| PPE68_KO | -0.621 | -0.682 |
| glycerol2 | 0.378 | 2.969 |
| lignocerate | 1.335 | 3.989 |
| oleate | 0.262 | -1.691 |
| phosphatidylcholine | 0.866 | 2.968 |
| acetate | 1.79 | 3.361 |
| glucAc | 1.354 | 2.601 |
| Rv0950ko | 0.751 | -0.826 |
| Rv1096ko | 1.339 | 0.905 |
| Rv3684ko | 1.038 | 2.112 |
| delta_otsA_trehalose | 0.198 | -0.27 |