Top 10 genes with highest correlation to Rv3072c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0104/- | (cc=0.6111) | info on Rv0104/- |
| Rv1971/mce3F | (cc=0.6028) | info on Rv1971/mce3F |
| Rv3086/adhD | (cc=0.6009) | info on Rv3086/adhD |
| Rv2208/cobS | (cc=0.5119) | info on Rv2208/cobS |
| Rv1774/- | (cc=0.5039) | info on Rv1774/- |
| Rv2638/- | (cc=0.5021) | info on Rv2638/- |
| Rv0008c/- | (cc=0.4975) | info on Rv0008c/- |
| Rv3353c/- | (cc=0.4967) | info on Rv3353c/- |
| Rv0254c/cobU | (cc=0.4951) | info on Rv0254c/cobU |
| Rv2622/- | (cc=0.4889) | info on Rv2622/- |
Correlation of Rv3072c/- with Rv0254c/cobU
Normalized LFCs for Rv3072c/-:
(description and provenance of datasets)
| Rv3072c/- | Rv0254c/cobU | |
| Fe_supp_jason_reseq | 0.183 | 0.731 |
| low_pH_jason_reseq | 0.299 | -0.37 |
| NO_jason_reseq | -0.05 | -0.995 |
| B6_jason_reseq | -0.809 | -0.688 |
| MHCII_jason_reseq | -0.83 | -0.842 |
| Isoniazid02 | -2.282 | -2.808 |
| Rifampicin4 | 0.409 | 0.636 |
| Ethambutol3 | -1.577 | -2.219 |
| Meropenem3 | -0.836 | -0.526 |
| Vancomycin16 | -0.881 | -0.515 |
| Rv2680_day32 | -0.339 | 0.338 |
| H37Rv_KO_MarP | 0.09 | -0.145 |
| hypoxia_3wks | -0.339 | -0.475 |
| hypoxia_6wks | -0.238 | 0.411 |
| glycerol | -0.967 | 0.807 |
| cholesterol | -0.91 | 0.558 |
| AJ | 0.523 | 0.434 |
| Bibs02 | 0.166 | -0.136 |
| Bibs02c | -1.679 | -1.234 |
| BL6 | -0.064 | 0.446 |
| BL6a | -1.29 | -0.809 |
| BXD01 | -0.397 | -1.084 |
| BXD010 | -1.046 | -0.767 |
| BXD011 | -0.715 | -0.501 |
| BXD03 | -1.325 | -0.085 |
| BXD04 | 0.0 | -0.415 |
| BXD05 | -0.355 | -0.413 |
| BXD06 | -0.32 | -0.322 |
| BXD07 | -1.335 | -0.652 |
| BXD08 | -0.169 | 0.38 |
| BXD09 | -0.092 | -0.268 |
| CAST | -0.118 | -1.298 |
| CCcont | -0.189 | 0.36 |
| DS01 | 0.044 | -0.861 |
| DS02 | 0.424 | -1.363 |
| DS04 | 0.242 | -1.727 |
| DS0c | -0.435 | 0.077 |
| GP01 | 0.309 | 0.995 |
| GP02 | 0.5 | -0.995 |
| GP0c | 0.942 | -0.178 |
| NOD | -0.503 | -0.13 |
| NZO | -0.24 | 0.399 |
| PWK | -0.013 | -0.257 |
| H37Rv_KO_CtpC | 0.857 | -0.651 |
| H37Rv_KO_CtpD | 1.134 | 1.216 |
| H37Rv_KO_Rv1272 | -0.704 | 0.117 |
| H37Rv_KO_SugABC | -0.987 | 0.663 |
| H37Rv_KO_MbtN | -0.962 | -0.228 |
| Trans05 | 0.016 | -0.636 |
| macrophage_unactivated | 0.379 | 0.183 |
| IL1 | -1.023 | 0.234 |
| Rapamycin | -0.718 | 0.97 |
| Tcell | -1.365 | 0.391 |
| GMCSF | -0.248 | 1.249 |
| IFNab | -0.828 | 0.901 |
| IFNg | -0.66 | 0.665 |
| IFNg_GMCSF1 | -0.035 | 0.974 |
| Rv1432_day32 | 1.352 | -0.334 |
| Rv1565c_day32 | -0.916 | 0.278 |
| secA2_input | -0.404 | 0.726 |
| delta_Rv3594 | 0.754 | -0.063 |
| delta_Rv3717 | 0.351 | 0.35 |
| delta_Rv3811 | 0.733 | 0.205 |
| delta_Rv0954 | 0.448 | 0.451 |
| PonA1 | 0.648 | 0.684 |
| EccD1_KO | -0.671 | -0.635 |
| EspI_KO | -1.406 | -1.577 |
| PE35_KO | -0.98 | -0.68 |
| PPE68_KO | -0.621 | -0.637 |
| glycerol2 | 0.378 | 1.188 |
| lignocerate | 1.335 | 1.579 |
| oleate | 0.262 | -0.079 |
| phosphatidylcholine | 0.866 | 0.962 |
| acetate | 1.79 | 2.071 |
| glucAc | 1.354 | 1.662 |
| Rv0950ko | 0.751 | 0.88 |
| Rv1096ko | 1.339 | 0.715 |
| Rv3684ko | 1.038 | 0.327 |
| delta_otsA_trehalose | 0.198 | 0.065 |