Top 10 genes with highest correlation to Rv3072c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0104/- | (cc=0.6111) | info on Rv0104/- |
| Rv1971/mce3F | (cc=0.6028) | info on Rv1971/mce3F |
| Rv3086/adhD | (cc=0.6009) | info on Rv3086/adhD |
| Rv2208/cobS | (cc=0.5119) | info on Rv2208/cobS |
| Rv1774/- | (cc=0.5039) | info on Rv1774/- |
| Rv2638/- | (cc=0.5021) | info on Rv2638/- |
| Rv0008c/- | (cc=0.4975) | info on Rv0008c/- |
| Rv3353c/- | (cc=0.4967) | info on Rv3353c/- |
| Rv0254c/cobU | (cc=0.4951) | info on Rv0254c/cobU |
| Rv2622/- | (cc=0.4889) | info on Rv2622/- |
Correlation of Rv3072c/- with Rv0104/-
Normalized LFCs for Rv3072c/-:
(description and provenance of datasets)
| Rv3072c/- | Rv0104/- | |
| Fe_supp_jason_reseq | 0.183 | -0.035 |
| low_pH_jason_reseq | 0.299 | -0.174 |
| NO_jason_reseq | -0.05 | -0.312 |
| B6_jason_reseq | -0.809 | -0.115 |
| MHCII_jason_reseq | -0.83 | 0.219 |
| Isoniazid02 | -2.282 | -1.328 |
| Rifampicin4 | 0.409 | 0.493 |
| Ethambutol3 | -1.577 | -0.627 |
| Meropenem3 | -0.836 | -0.302 |
| Vancomycin16 | -0.881 | -0.432 |
| Rv2680_day32 | -0.339 | -0.48 |
| H37Rv_KO_MarP | 0.09 | 0.381 |
| hypoxia_3wks | -0.339 | -0.108 |
| hypoxia_6wks | -0.238 | -0.436 |
| glycerol | -0.967 | 0.14 |
| cholesterol | -0.91 | -0.071 |
| AJ | 0.523 | -0.341 |
| Bibs02 | 0.166 | 0.177 |
| Bibs02c | -1.679 | 0.062 |
| BL6 | -0.064 | 0.595 |
| BL6a | -1.29 | 0.255 |
| BXD01 | -0.397 | -0.089 |
| BXD010 | -1.046 | 0.686 |
| BXD011 | -0.715 | 0.15 |
| BXD03 | -1.325 | 0.024 |
| BXD04 | 0.0 | 0.079 |
| BXD05 | -0.355 | 0.502 |
| BXD06 | -0.32 | 0.0 |
| BXD07 | -1.335 | 0.119 |
| BXD08 | -0.169 | -0.196 |
| BXD09 | -0.092 | 0.253 |
| CAST | -0.118 | -0.23 |
| CCcont | -0.189 | 0.3 |
| DS01 | 0.044 | -0.056 |
| DS02 | 0.424 | 0.09 |
| DS04 | 0.242 | 0.25 |
| DS0c | -0.435 | 0.013 |
| GP01 | 0.309 | 1.17 |
| GP02 | 0.5 | 0.736 |
| GP0c | 0.942 | 0.733 |
| NOD | -0.503 | -0.21 |
| NZO | -0.24 | 0.012 |
| PWK | -0.013 | 0.07 |
| H37Rv_KO_CtpC | 0.857 | 0.53 |
| H37Rv_KO_CtpD | 1.134 | 0.483 |
| H37Rv_KO_Rv1272 | -0.704 | -0.416 |
| H37Rv_KO_SugABC | -0.987 | 1.248 |
| H37Rv_KO_MbtN | -0.962 | 0.358 |
| Trans05 | 0.016 | 0.331 |
| macrophage_unactivated | 0.379 | -0.041 |
| IL1 | -1.023 | -0.433 |
| Rapamycin | -0.718 | 0.058 |
| Tcell | -1.365 | 0.14 |
| GMCSF | -0.248 | 0.016 |
| IFNab | -0.828 | -0.193 |
| IFNg | -0.66 | -0.067 |
| IFNg_GMCSF1 | -0.035 | -0.223 |
| Rv1432_day32 | 1.352 | 0.269 |
| Rv1565c_day32 | -0.916 | -0.014 |
| secA2_input | -0.404 | -0.559 |
| delta_Rv3594 | 0.754 | 0.567 |
| delta_Rv3717 | 0.351 | 0.488 |
| delta_Rv3811 | 0.733 | 0.72 |
| delta_Rv0954 | 0.448 | 0.842 |
| PonA1 | 0.648 | 1.024 |
| EccD1_KO | -0.671 | -0.086 |
| EspI_KO | -1.406 | -0.519 |
| PE35_KO | -0.98 | -0.111 |
| PPE68_KO | -0.621 | -0.291 |
| glycerol2 | 0.378 | 0.476 |
| lignocerate | 1.335 | 0.939 |
| oleate | 0.262 | 0.109 |
| phosphatidylcholine | 0.866 | 0.462 |
| acetate | 1.79 | 0.994 |
| glucAc | 1.354 | 0.805 |
| Rv0950ko | 0.751 | 0.591 |
| Rv1096ko | 1.339 | 0.905 |
| Rv3684ko | 1.038 | 0.92 |
| delta_otsA_trehalose | 0.198 | 0.359 |