Top 10 genes with highest correlation to Rv3038c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1973/- | (cc=0.6239) | info on Rv1973/- |
| Rv3607c/folB | (cc=0.5805) | info on Rv3607c/folB |
| Rv3163c/- | (cc=0.5798) | info on Rv3163c/- |
| Rv2232/ptkA | (cc=0.578) | info on Rv2232/ptkA |
| Rv1276c/- | (cc=0.5751) | info on Rv1276c/- |
| Rv1734c/- | (cc=0.5659) | info on Rv1734c/- |
| Rv1735c/- | (cc=0.5636) | info on Rv1735c/- |
| Rv2285/- | (cc=0.563) | info on Rv2285/- |
| Rv2489c/- | (cc=0.5417) | info on Rv2489c/- |
| Rv2174/mptA | (cc=0.5363) | info on Rv2174/mptA |
Correlation of Rv3038c/- with Rv2489c/-
Normalized LFCs for Rv3038c/-:
(description and provenance of datasets)
| Rv3038c/- | Rv2489c/- | |
| Fe_supp_jason_reseq | -0.923 | -1.013 |
| low_pH_jason_reseq | 0.694 | -1.445 |
| NO_jason_reseq | 1.712 | -0.081 |
| B6_jason_reseq | 1.289 | 0.492 |
| MHCII_jason_reseq | 1.357 | -0.589 |
| Isoniazid02 | 0.383 | -1.867 |
| Rifampicin4 | 0.374 | -0.068 |
| Ethambutol3 | 0.168 | -1.887 |
| Meropenem3 | 0.315 | -2.193 |
| Vancomycin16 | 0.698 | -1.143 |
| Rv2680_day32 | 0.0 | 1.99 |
| H37Rv_KO_MarP | 0.214 | -0.082 |
| hypoxia_3wks | 1.388 | -0.02 |
| hypoxia_6wks | 1.034 | -0.393 |
| glycerol | 1.69 | -0.753 |
| cholesterol | 0.703 | -0.125 |
| AJ | 1.126 | 0.824 |
| Bibs02 | 1.142 | -0.347 |
| Bibs02c | -0.564 | -0.271 |
| BL6 | -1.031 | -0.412 |
| BL6a | -0.416 | -0.682 |
| BXD01 | 0.593 | -0.975 |
| BXD010 | -1.056 | -0.612 |
| BXD011 | -0.602 | -1.558 |
| BXD03 | -1.115 | -1.984 |
| BXD04 | -0.333 | -1.492 |
| BXD05 | -0.065 | -0.694 |
| BXD06 | -0.535 | -0.229 |
| BXD07 | 0.0 | -1.118 |
| BXD08 | 0.899 | -1.045 |
| BXD09 | -1.018 | -1.074 |
| CAST | 0.0 | 0.831 |
| CCcont | -1.082 | -1.79 |
| DS01 | 1.283 | 0.527 |
| DS02 | 2.28 | 0.548 |
| DS04 | 0.822 | 1.113 |
| DS0c | 1.354 | 0.806 |
| GP01 | 0.387 | 0.343 |
| GP02 | 2.435 | 0.134 |
| GP0c | 0.173 | -0.899 |
| NOD | -0.605 | 1.015 |
| NZO | 0.348 | 0.523 |
| PWK | 0.419 | 0.789 |
| H37Rv_KO_CtpC | -0.249 | -0.744 |
| H37Rv_KO_CtpD | -0.061 | 0.098 |
| H37Rv_KO_Rv1272 | -0.775 | -0.94 |
| H37Rv_KO_SugABC | -0.718 | -0.572 |
| H37Rv_KO_MbtN | 0.137 | -1.755 |
| Trans05 | -1.077 | -0.055 |
| macrophage_unactivated | -0.338 | -2.276 |
| IL1 | -1.032 | -1.605 |
| Rapamycin | -1.488 | -2.029 |
| Tcell | -0.349 | -1.812 |
| GMCSF | -1.281 | -1.447 |
| IFNab | -1.466 | -1.342 |
| IFNg | -1.296 | -0.837 |
| IFNg_GMCSF1 | -1.093 | -1.348 |
| Rv1432_day32 | 0.799 | -0.877 |
| Rv1565c_day32 | 0.0 | -0.351 |
| secA2_input | -0.438 | -0.474 |
| delta_Rv3594 | 1.037 | 0.824 |
| delta_Rv3717 | 1.735 | 1.156 |
| delta_Rv3811 | 1.966 | 0.346 |
| delta_Rv0954 | 0.99 | 0.933 |
| PonA1 | 1.458 | 1.528 |
| EccD1_KO | 0.257 | 0.046 |
| EspI_KO | 0.0 | 0.411 |
| PE35_KO | 1.383 | -0.061 |
| PPE68_KO | 0.928 | -0.067 |
| glycerol2 | -0.263 | -1.67 |
| lignocerate | -0.983 | -2.159 |
| oleate | 0.61 | -0.788 |
| phosphatidylcholine | 0.0 | -1.669 |
| acetate | -1.814 | -2.329 |
| glucAc | -2.228 | -1.649 |
| Rv0950ko | 0.748 | 0.808 |
| Rv1096ko | 0.513 | 0.654 |
| Rv3684ko | -0.305 | 0.668 |
| delta_otsA_trehalose | 0.991 | 0.635 |