Top 10 genes with highest correlation to Rv3038c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1973/- | (cc=0.6239) | info on Rv1973/- |
| Rv3607c/folB | (cc=0.5805) | info on Rv3607c/folB |
| Rv3163c/- | (cc=0.5798) | info on Rv3163c/- |
| Rv2232/ptkA | (cc=0.578) | info on Rv2232/ptkA |
| Rv1276c/- | (cc=0.5751) | info on Rv1276c/- |
| Rv1734c/- | (cc=0.5659) | info on Rv1734c/- |
| Rv1735c/- | (cc=0.5636) | info on Rv1735c/- |
| Rv2285/- | (cc=0.563) | info on Rv2285/- |
| Rv2489c/- | (cc=0.5417) | info on Rv2489c/- |
| Rv2174/mptA | (cc=0.5363) | info on Rv2174/mptA |
Correlation of Rv3038c/- with Rv2232/ptkA
Normalized LFCs for Rv3038c/-:
(description and provenance of datasets)
| Rv3038c/- | Rv2232/ptkA | |
| Fe_supp_jason_reseq | -0.923 | -1.782 |
| low_pH_jason_reseq | 0.694 | -0.626 |
| NO_jason_reseq | 1.712 | 0.108 |
| B6_jason_reseq | 1.289 | 0.489 |
| MHCII_jason_reseq | 1.357 | 1.444 |
| Isoniazid02 | 0.383 | 0.455 |
| Rifampicin4 | 0.374 | -0.439 |
| Ethambutol3 | 0.168 | 0.638 |
| Meropenem3 | 0.315 | 1.542 |
| Vancomycin16 | 0.698 | -0.43 |
| Rv2680_day32 | 0.0 | 0.947 |
| H37Rv_KO_MarP | 0.214 | 1.226 |
| hypoxia_3wks | 1.388 | 0.112 |
| hypoxia_6wks | 1.034 | -0.311 |
| glycerol | 1.69 | 1.271 |
| cholesterol | 0.703 | 0.0 |
| AJ | 1.126 | 0.156 |
| Bibs02 | 1.142 | 0.588 |
| Bibs02c | -0.564 | 1.441 |
| BL6 | -1.031 | -2.396 |
| BL6a | -0.416 | 0.209 |
| BXD01 | 0.593 | -0.608 |
| BXD010 | -1.056 | -1.641 |
| BXD011 | -0.602 | -0.741 |
| BXD03 | -1.115 | -2.017 |
| BXD04 | -0.333 | 0.131 |
| BXD05 | -0.065 | -0.462 |
| BXD06 | -0.535 | -0.335 |
| BXD07 | 0.0 | -0.448 |
| BXD08 | 0.899 | -0.357 |
| BXD09 | -1.018 | -1.346 |
| CAST | 0.0 | 0.517 |
| CCcont | -1.082 | -2.063 |
| DS01 | 1.283 | 0.71 |
| DS02 | 2.28 | 0.654 |
| DS04 | 0.822 | 0.583 |
| DS0c | 1.354 | 0.06 |
| GP01 | 0.387 | -0.164 |
| GP02 | 2.435 | 0.648 |
| GP0c | 0.173 | -0.421 |
| NOD | -0.605 | 0.604 |
| NZO | 0.348 | 0.309 |
| PWK | 0.419 | -0.492 |
| H37Rv_KO_CtpC | -0.249 | -0.466 |
| H37Rv_KO_CtpD | -0.061 | -1.686 |
| H37Rv_KO_Rv1272 | -0.775 | -0.257 |
| H37Rv_KO_SugABC | -0.718 | 0.529 |
| H37Rv_KO_MbtN | 0.137 | -1.024 |
| Trans05 | -1.077 | -2.026 |
| macrophage_unactivated | -0.338 | -3.592 |
| IL1 | -1.032 | -4.547 |
| Rapamycin | -1.488 | -3.67 |
| Tcell | -0.349 | -2.401 |
| GMCSF | -1.281 | -2.572 |
| IFNab | -1.466 | -2.098 |
| IFNg | -1.296 | -2.603 |
| IFNg_GMCSF1 | -1.093 | -2.181 |
| Rv1432_day32 | 0.799 | 1.119 |
| Rv1565c_day32 | 0.0 | -0.24 |
| secA2_input | -0.438 | 0.969 |
| delta_Rv3594 | 1.037 | -1.048 |
| delta_Rv3717 | 1.735 | -0.394 |
| delta_Rv3811 | 1.966 | -0.498 |
| delta_Rv0954 | 0.99 | -1.16 |
| PonA1 | 1.458 | 0.227 |
| EccD1_KO | 0.257 | -0.388 |
| EspI_KO | 0.0 | 1.8 |
| PE35_KO | 1.383 | -0.254 |
| PPE68_KO | 0.928 | 0.749 |
| glycerol2 | -0.263 | -1.354 |
| lignocerate | -0.983 | -1.695 |
| oleate | 0.61 | -0.315 |
| phosphatidylcholine | 0.0 | -1.217 |
| acetate | -1.814 | -1.445 |
| glucAc | -2.228 | -1.306 |
| Rv0950ko | 0.748 | 0.078 |
| Rv1096ko | 0.513 | -0.793 |
| Rv3684ko | -0.305 | 0.0 |
| delta_otsA_trehalose | 0.991 | 0.83 |