Top 10 genes with highest correlation to Rv3038c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1973/- | (cc=0.6239) | info on Rv1973/- |
| Rv3607c/folB | (cc=0.5805) | info on Rv3607c/folB |
| Rv3163c/- | (cc=0.5798) | info on Rv3163c/- |
| Rv2232/ptkA | (cc=0.578) | info on Rv2232/ptkA |
| Rv1276c/- | (cc=0.5751) | info on Rv1276c/- |
| Rv1734c/- | (cc=0.5659) | info on Rv1734c/- |
| Rv1735c/- | (cc=0.5636) | info on Rv1735c/- |
| Rv2285/- | (cc=0.563) | info on Rv2285/- |
| Rv2489c/- | (cc=0.5417) | info on Rv2489c/- |
| Rv2174/mptA | (cc=0.5363) | info on Rv2174/mptA |
Correlation of Rv3038c/- with Rv2285/-
Normalized LFCs for Rv3038c/-:
(description and provenance of datasets)
| Rv3038c/- | Rv2285/- | |
| Fe_supp_jason_reseq | -0.923 | -0.933 |
| low_pH_jason_reseq | 0.694 | 0.684 |
| NO_jason_reseq | 1.712 | 0.089 |
| B6_jason_reseq | 1.289 | 1.203 |
| MHCII_jason_reseq | 1.357 | -0.13 |
| Isoniazid02 | 0.383 | 0.528 |
| Rifampicin4 | 0.374 | 0.043 |
| Ethambutol3 | 0.168 | 0.331 |
| Meropenem3 | 0.315 | 1.58 |
| Vancomycin16 | 0.698 | 0.085 |
| Rv2680_day32 | 0.0 | -0.21 |
| H37Rv_KO_MarP | 0.214 | -0.341 |
| hypoxia_3wks | 1.388 | -0.12 |
| hypoxia_6wks | 1.034 | -0.234 |
| glycerol | 1.69 | 0.152 |
| cholesterol | 0.703 | 0.508 |
| AJ | 1.126 | 0.303 |
| Bibs02 | 1.142 | 0.419 |
| Bibs02c | -0.564 | -0.408 |
| BL6 | -1.031 | -0.632 |
| BL6a | -0.416 | -0.426 |
| BXD01 | 0.593 | -0.915 |
| BXD010 | -1.056 | -0.453 |
| BXD011 | -0.602 | -0.45 |
| BXD03 | -1.115 | -0.5 |
| BXD04 | -0.333 | -0.681 |
| BXD05 | -0.065 | 0.278 |
| BXD06 | -0.535 | -0.208 |
| BXD07 | 0.0 | -0.65 |
| BXD08 | 0.899 | -0.696 |
| BXD09 | -1.018 | -0.157 |
| CAST | 0.0 | 0.334 |
| CCcont | -1.082 | -1.587 |
| DS01 | 1.283 | -0.192 |
| DS02 | 2.28 | 0.306 |
| DS04 | 0.822 | -1.162 |
| DS0c | 1.354 | 0.325 |
| GP01 | 0.387 | -0.129 |
| GP02 | 2.435 | 0.579 |
| GP0c | 0.173 | -0.17 |
| NOD | -0.605 | 0.4 |
| NZO | 0.348 | 0.715 |
| PWK | 0.419 | 0.331 |
| H37Rv_KO_CtpC | -0.249 | -0.805 |
| H37Rv_KO_CtpD | -0.061 | -0.344 |
| H37Rv_KO_Rv1272 | -0.775 | -0.521 |
| H37Rv_KO_SugABC | -0.718 | -0.234 |
| H37Rv_KO_MbtN | 0.137 | -0.782 |
| Trans05 | -1.077 | -0.579 |
| macrophage_unactivated | -0.338 | -0.129 |
| IL1 | -1.032 | 0.03 |
| Rapamycin | -1.488 | -0.427 |
| Tcell | -0.349 | -0.342 |
| GMCSF | -1.281 | -1.336 |
| IFNab | -1.466 | -0.626 |
| IFNg | -1.296 | -0.949 |
| IFNg_GMCSF1 | -1.093 | 0.094 |
| Rv1432_day32 | 0.799 | 0.739 |
| Rv1565c_day32 | 0.0 | -0.248 |
| secA2_input | -0.438 | 0.027 |
| delta_Rv3594 | 1.037 | 0.274 |
| delta_Rv3717 | 1.735 | 0.676 |
| delta_Rv3811 | 1.966 | 0.877 |
| delta_Rv0954 | 0.99 | 0.707 |
| PonA1 | 1.458 | 0.375 |
| EccD1_KO | 0.257 | 1.437 |
| EspI_KO | 0.0 | 0.779 |
| PE35_KO | 1.383 | 0.723 |
| PPE68_KO | 0.928 | 0.835 |
| glycerol2 | -0.263 | -0.513 |
| lignocerate | -0.983 | -0.653 |
| oleate | 0.61 | 0.069 |
| phosphatidylcholine | 0.0 | -0.202 |
| acetate | -1.814 | -0.861 |
| glucAc | -2.228 | -0.887 |
| Rv0950ko | 0.748 | -0.431 |
| Rv1096ko | 0.513 | 0.751 |
| Rv3684ko | -0.305 | 0.508 |
| delta_otsA_trehalose | 0.991 | 0.456 |