Top 10 genes with highest correlation to Rv2945c/lppX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2942/mmpL7 | (cc=0.8896) | info on Rv2942/mmpL7 |
| Rv2936/drrA | (cc=0.8513) | info on Rv2936/drrA |
| Rv2938/drrC | (cc=0.7964) | info on Rv2938/drrC |
| Rv2937/drrB | (cc=0.7784) | info on Rv2937/drrB |
| Rv2946c/pks1 | (cc=0.6517) | info on Rv2946c/pks1 |
| Rv3868/eccA1 | (cc=0.6516) | info on Rv3868/eccA1 |
| Rv1109c/- | (cc=0.6122) | info on Rv1109c/- |
| Rv2952/- | (cc=0.6077) | info on Rv2952/- |
| Rv1236/sugA | (cc=0.586) | info on Rv1236/sugA |
| Rv2475c/- | (cc=0.5694) | info on Rv2475c/- |
Correlation of Rv2945c/lppX with Rv2938/drrC
Normalized LFCs for Rv2945c/lppX:
(description and provenance of datasets)
| Rv2945c/lppX | Rv2938/drrC | |
| Fe_supp_jason_reseq | 1.534 | 0.434 |
| low_pH_jason_reseq | -0.718 | 1.402 |
| NO_jason_reseq | -2.814 | -2.788 |
| B6_jason_reseq | -1.618 | -1.025 |
| MHCII_jason_reseq | -1.649 | -1.658 |
| Isoniazid02 | -1.71 | -1.053 |
| Rifampicin4 | -1.652 | -1.836 |
| Ethambutol3 | -0.66 | -0.187 |
| Meropenem3 | -1.592 | -0.414 |
| Vancomycin16 | -1.181 | -1.722 |
| Rv2680_day32 | -1.547 | -2.522 |
| H37Rv_KO_MarP | -1.849 | -3.032 |
| hypoxia_3wks | 3.545 | 2.508 |
| hypoxia_6wks | 3.003 | 2.721 |
| glycerol | -0.846 | 0.611 |
| cholesterol | 2.943 | 2.289 |
| AJ | -4.662 | -3.787 |
| Bibs02 | -0.456 | -1.285 |
| Bibs02c | -1.599 | -0.964 |
| BL6 | -0.67 | 0.343 |
| BL6a | -1.494 | 0.072 |
| BXD01 | 0.569 | 0.999 |
| BXD010 | 0.636 | 0.721 |
| BXD011 | -0.391 | 1.051 |
| BXD03 | -1.211 | 0.185 |
| BXD04 | -0.331 | 0.653 |
| BXD05 | -0.824 | 0.472 |
| BXD06 | -0.145 | 0.536 |
| BXD07 | -0.38 | 0.737 |
| BXD08 | 0.397 | 0.63 |
| BXD09 | -0.599 | 0.051 |
| CAST | -5.346 | -2.257 |
| CCcont | 0.563 | 1.192 |
| DS01 | -1.531 | 0.068 |
| DS02 | -1.848 | 0.446 |
| DS04 | -2.275 | -1.178 |
| DS0c | -0.861 | 0.154 |
| GP01 | -1.269 | -1.24 |
| GP02 | -1.894 | -1.711 |
| GP0c | 0.869 | 0.913 |
| NOD | -4.296 | -1.852 |
| NZO | -4.541 | -2.875 |
| PWK | -3.876 | -2.663 |
| H37Rv_KO_CtpC | -2.201 | -0.111 |
| H37Rv_KO_CtpD | -1.307 | -0.116 |
| H37Rv_KO_Rv1272 | 0.648 | 0.634 |
| H37Rv_KO_SugABC | 0.604 | 1.366 |
| H37Rv_KO_MbtN | 1.486 | 1.331 |
| Trans05 | -0.086 | 1.191 |
| macrophage_unactivated | -0.53 | -0.167 |
| IL1 | -0.836 | -0.504 |
| Rapamycin | -1.356 | -1.338 |
| Tcell | 0.661 | 2.848 |
| GMCSF | -2.044 | -3.174 |
| IFNab | 0.596 | -0.206 |
| IFNg | -3.613 | -4.348 |
| IFNg_GMCSF1 | -3.708 | -4.141 |
| Rv1432_day32 | -4.049 | -4.85 |
| Rv1565c_day32 | -3.691 | -4.634 |
| secA2_input | -0.834 | -1.23 |
| delta_Rv3594 | 0.503 | -1.296 |
| delta_Rv3717 | 0.437 | -1.417 |
| delta_Rv3811 | -0.126 | -1.5 |
| delta_Rv0954 | -0.103 | -1.472 |
| PonA1 | -0.155 | -1.151 |
| EccD1_KO | -0.23 | 0.27 |
| EspI_KO | 0.405 | 0.191 |
| PE35_KO | -0.659 | 0.195 |
| PPE68_KO | -0.458 | 0.307 |
| glycerol2 | 0.762 | 0.071 |
| lignocerate | 0.107 | 0.192 |
| oleate | 0.763 | -0.308 |
| phosphatidylcholine | 0.564 | 0.256 |
| acetate | -0.605 | -0.178 |
| glucAc | -0.502 | 0.006 |
| Rv0950ko | -0.118 | -0.615 |
| Rv1096ko | 1.004 | 0.648 |
| Rv3684ko | -0.013 | -0.38 |
| delta_otsA_trehalose | 1.299 | -0.24 |