Top 10 genes with highest correlation to Rv2924c/fpg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0082/- | (cc=0.5112) | info on Rv0082/- |
| Rv3704c/gshA | (cc=0.4966) | info on Rv3704c/gshA |
| Rv2559c/- | (cc=0.494) | info on Rv2559c/- |
| Rv0228/- | (cc=0.4928) | info on Rv0228/- |
| Rv3354/- | (cc=0.4919) | info on Rv3354/- |
| Rv1973/- | (cc=0.4875) | info on Rv1973/- |
| Rv2701c/suhB | (cc=0.4843) | info on Rv2701c/suhB |
| Rv0022c/whiB5 | (cc=0.4739) | info on Rv0022c/whiB5 |
| Rv2902c/rnhB | (cc=0.465) | info on Rv2902c/rnhB |
| Rv0275c/- | (cc=0.4635) | info on Rv0275c/- |
Correlation of Rv2924c/fpg with Rv3354/-
Normalized LFCs for Rv2924c/fpg:
(description and provenance of datasets)
| Rv2924c/fpg | Rv3354/- | |
| Fe_supp_jason_reseq | -0.459 | -1.138 |
| low_pH_jason_reseq | -0.129 | -0.381 |
| NO_jason_reseq | 0.0 | -0.793 |
| B6_jason_reseq | 0.475 | 0.985 |
| MHCII_jason_reseq | -0.432 | 1.019 |
| Isoniazid02 | 0.196 | 1.043 |
| Rifampicin4 | -0.246 | 0.125 |
| Ethambutol3 | -0.27 | 0.398 |
| Meropenem3 | 1.267 | 1.179 |
| Vancomycin16 | 0.443 | 0.162 |
| Rv2680_day32 | 0.233 | 0.659 |
| H37Rv_KO_MarP | 0.992 | 0.422 |
| hypoxia_3wks | -0.231 | -0.347 |
| hypoxia_6wks | 0.422 | -0.595 |
| glycerol | 0.118 | 0.674 |
| cholesterol | 0.116 | 0.892 |
| AJ | 0.291 | -0.171 |
| Bibs02 | 0.287 | -0.029 |
| Bibs02c | -0.118 | 0.596 |
| BL6 | -0.247 | -0.912 |
| BL6a | -0.33 | -0.067 |
| BXD01 | -0.808 | -1.687 |
| BXD010 | -0.673 | -1.434 |
| BXD011 | -0.584 | -2.812 |
| BXD03 | -1.218 | -2.487 |
| BXD04 | -0.104 | -1.729 |
| BXD05 | -0.204 | -1.146 |
| BXD06 | -0.747 | -1.932 |
| BXD07 | -0.548 | -2.262 |
| BXD08 | -0.521 | -1.667 |
| BXD09 | -0.6 | -2.542 |
| CAST | 0.272 | 0.097 |
| CCcont | -1.013 | -1.82 |
| DS01 | -0.113 | -0.077 |
| DS02 | -0.715 | 0.269 |
| DS04 | 0.07 | 0.395 |
| DS0c | -0.512 | -0.597 |
| GP01 | -0.283 | -1.486 |
| GP02 | 1.332 | -0.295 |
| GP0c | 0.007 | -0.754 |
| NOD | -0.029 | -0.169 |
| NZO | 0.367 | 0.127 |
| PWK | 0.232 | 0.367 |
| H37Rv_KO_CtpC | -0.092 | -0.788 |
| H37Rv_KO_CtpD | -0.017 | -1.146 |
| H37Rv_KO_Rv1272 | -1.579 | -0.927 |
| H37Rv_KO_SugABC | -0.578 | -0.855 |
| H37Rv_KO_MbtN | -0.208 | -1.624 |
| Trans05 | -0.86 | -0.244 |
| macrophage_unactivated | -0.852 | -1.654 |
| IL1 | -0.291 | -1.649 |
| Rapamycin | -0.316 | -1.034 |
| Tcell | -0.472 | -1.473 |
| GMCSF | -0.372 | -2.118 |
| IFNab | -0.961 | -2.056 |
| IFNg | -0.299 | -0.949 |
| IFNg_GMCSF1 | -0.562 | -0.641 |
| Rv1432_day32 | -0.627 | 0.3 |
| Rv1565c_day32 | 0.142 | 0.635 |
| secA2_input | 0.49 | 0.645 |
| delta_Rv3594 | 0.182 | -0.395 |
| delta_Rv3717 | -0.287 | -0.21 |
| delta_Rv3811 | -0.158 | 0.592 |
| delta_Rv0954 | 0.769 | 0.58 |
| PonA1 | -0.663 | -0.802 |
| EccD1_KO | -0.082 | 1.217 |
| EspI_KO | -0.374 | 1.201 |
| PE35_KO | -0.423 | 0.204 |
| PPE68_KO | -0.397 | 1.254 |
| glycerol2 | -0.045 | 1.595 |
| lignocerate | 0.074 | 1.672 |
| oleate | 0.027 | 0.822 |
| phosphatidylcholine | 0.136 | 1.291 |
| acetate | -0.667 | 1.047 |
| glucAc | -0.431 | 1.449 |
| Rv0950ko | 0.501 | 0.365 |
| Rv1096ko | -0.296 | 0.268 |
| Rv3684ko | -0.167 | 0.933 |
| delta_otsA_trehalose | 1.731 | 0.808 |