Top 10 genes with highest correlation to Rv2924c/fpg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0082/- | (cc=0.5112) | info on Rv0082/- |
| Rv3704c/gshA | (cc=0.4966) | info on Rv3704c/gshA |
| Rv2559c/- | (cc=0.494) | info on Rv2559c/- |
| Rv0228/- | (cc=0.4928) | info on Rv0228/- |
| Rv3354/- | (cc=0.4919) | info on Rv3354/- |
| Rv1973/- | (cc=0.4875) | info on Rv1973/- |
| Rv2701c/suhB | (cc=0.4843) | info on Rv2701c/suhB |
| Rv0022c/whiB5 | (cc=0.4739) | info on Rv0022c/whiB5 |
| Rv2902c/rnhB | (cc=0.465) | info on Rv2902c/rnhB |
| Rv0275c/- | (cc=0.4635) | info on Rv0275c/- |
Correlation of Rv2924c/fpg with Rv0228/-
Normalized LFCs for Rv2924c/fpg:
(description and provenance of datasets)
| Rv2924c/fpg | Rv0228/- | |
| Fe_supp_jason_reseq | -0.459 | 1.07 |
| low_pH_jason_reseq | -0.129 | 0.0 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | 0.475 | 1.759 |
| MHCII_jason_reseq | -0.432 | 0.37 |
| Isoniazid02 | 0.196 | -0.167 |
| Rifampicin4 | -0.246 | 0.558 |
| Ethambutol3 | -0.27 | -0.14 |
| Meropenem3 | 1.267 | 0.128 |
| Vancomycin16 | 0.443 | 0.796 |
| Rv2680_day32 | 0.233 | 0.0 |
| H37Rv_KO_MarP | 0.992 | -0.684 |
| hypoxia_3wks | -0.231 | 0.678 |
| hypoxia_6wks | 0.422 | -0.626 |
| glycerol | 0.118 | 0.585 |
| cholesterol | 0.116 | 0.915 |
| AJ | 0.291 | 0.05 |
| Bibs02 | 0.287 | 0.56 |
| Bibs02c | -0.118 | -1.66 |
| BL6 | -0.247 | -2.023 |
| BL6a | -0.33 | -2.66 |
| BXD01 | -0.808 | -2.107 |
| BXD010 | -0.673 | -2.072 |
| BXD011 | -0.584 | -2.06 |
| BXD03 | -1.218 | -2.187 |
| BXD04 | -0.104 | -2.0 |
| BXD05 | -0.204 | -2.177 |
| BXD06 | -0.747 | -2.159 |
| BXD07 | -0.548 | -2.24 |
| BXD08 | -0.521 | -2.151 |
| BXD09 | -0.6 | -2.273 |
| CAST | 0.272 | -0.389 |
| CCcont | -1.013 | -2.131 |
| DS01 | -0.113 | -0.727 |
| DS02 | -0.715 | -1.942 |
| DS04 | 0.07 | 0.779 |
| DS0c | -0.512 | -1.431 |
| GP01 | -0.283 | -1.597 |
| GP02 | 1.332 | -1.346 |
| GP0c | 0.007 | -2.103 |
| NOD | -0.029 | -0.83 |
| NZO | 0.367 | -0.285 |
| PWK | 0.232 | 0.168 |
| H37Rv_KO_CtpC | -0.092 | -2.628 |
| H37Rv_KO_CtpD | -0.017 | -1.922 |
| H37Rv_KO_Rv1272 | -1.579 | -2.281 |
| H37Rv_KO_SugABC | -0.578 | -1.503 |
| H37Rv_KO_MbtN | -0.208 | -1.667 |
| Trans05 | -0.86 | -1.983 |
| macrophage_unactivated | -0.852 | -2.923 |
| IL1 | -0.291 | -2.747 |
| Rapamycin | -0.316 | -2.842 |
| Tcell | -0.472 | -3.017 |
| GMCSF | -0.372 | -2.445 |
| IFNab | -0.961 | -2.799 |
| IFNg | -0.299 | -2.475 |
| IFNg_GMCSF1 | -0.562 | -1.386 |
| Rv1432_day32 | -0.627 | 0.0 |
| Rv1565c_day32 | 0.142 | 0.0 |
| secA2_input | 0.49 | 1.565 |
| delta_Rv3594 | 0.182 | 0.402 |
| delta_Rv3717 | -0.287 | 0.0 |
| delta_Rv3811 | -0.158 | 0.205 |
| delta_Rv0954 | 0.769 | 0.0 |
| PonA1 | -0.663 | 0.0 |
| EccD1_KO | -0.082 | -0.865 |
| EspI_KO | -0.374 | -0.359 |
| PE35_KO | -0.423 | -0.368 |
| PPE68_KO | -0.397 | -0.841 |
| glycerol2 | -0.045 | 0.0 |
| lignocerate | 0.074 | 0.591 |
| oleate | 0.027 | 0.0 |
| phosphatidylcholine | 0.136 | 0.193 |
| acetate | -0.667 | 0.0 |
| glucAc | -0.431 | 0.0 |
| Rv0950ko | 0.501 | 0.793 |
| Rv1096ko | -0.296 | 1.143 |
| Rv3684ko | -0.167 | 0.452 |
| delta_otsA_trehalose | 1.731 | 0.0 |