Top 10 genes with highest correlation to Rv2924c/fpg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0082/- | (cc=0.5112) | info on Rv0082/- |
| Rv3704c/gshA | (cc=0.4966) | info on Rv3704c/gshA |
| Rv2559c/- | (cc=0.494) | info on Rv2559c/- |
| Rv0228/- | (cc=0.4928) | info on Rv0228/- |
| Rv3354/- | (cc=0.4919) | info on Rv3354/- |
| Rv1973/- | (cc=0.4875) | info on Rv1973/- |
| Rv2701c/suhB | (cc=0.4843) | info on Rv2701c/suhB |
| Rv0022c/whiB5 | (cc=0.4739) | info on Rv0022c/whiB5 |
| Rv2902c/rnhB | (cc=0.465) | info on Rv2902c/rnhB |
| Rv0275c/- | (cc=0.4635) | info on Rv0275c/- |
Correlation of Rv2924c/fpg with Rv0082/-
Normalized LFCs for Rv2924c/fpg:
(description and provenance of datasets)
| Rv2924c/fpg | Rv0082/- | |
| Fe_supp_jason_reseq | -0.459 | 0.508 |
| low_pH_jason_reseq | -0.129 | 0.634 |
| NO_jason_reseq | 0.0 | -0.331 |
| B6_jason_reseq | 0.475 | 0.97 |
| MHCII_jason_reseq | -0.432 | 0.315 |
| Isoniazid02 | 0.196 | 0.047 |
| Rifampicin4 | -0.246 | 0.341 |
| Ethambutol3 | -0.27 | -0.168 |
| Meropenem3 | 1.267 | 0.289 |
| Vancomycin16 | 0.443 | -0.088 |
| Rv2680_day32 | 0.233 | 1.173 |
| H37Rv_KO_MarP | 0.992 | -0.03 |
| hypoxia_3wks | -0.231 | -0.55 |
| hypoxia_6wks | 0.422 | 0.758 |
| glycerol | 0.118 | 0.206 |
| cholesterol | 0.116 | -0.012 |
| AJ | 0.291 | 0.052 |
| Bibs02 | 0.287 | 0.0 |
| Bibs02c | -0.118 | 1.278 |
| BL6 | -0.247 | -3.413 |
| BL6a | -0.33 | 0.682 |
| BXD01 | -0.808 | -1.81 |
| BXD010 | -0.673 | -2.5 |
| BXD011 | -0.584 | -0.983 |
| BXD03 | -1.218 | -1.204 |
| BXD04 | -0.104 | -0.505 |
| BXD05 | -0.204 | -0.461 |
| BXD06 | -0.747 | -1.816 |
| BXD07 | -0.548 | -1.478 |
| BXD08 | -0.521 | -0.59 |
| BXD09 | -0.6 | -0.437 |
| CAST | 0.272 | 0.052 |
| CCcont | -1.013 | -2.708 |
| DS01 | -0.113 | -1.341 |
| DS02 | -0.715 | -0.61 |
| DS04 | 0.07 | -0.271 |
| DS0c | -0.512 | -1.604 |
| GP01 | -0.283 | -0.862 |
| GP02 | 1.332 | -0.294 |
| GP0c | 0.007 | -0.922 |
| NOD | -0.029 | -0.088 |
| NZO | 0.367 | 0.718 |
| PWK | 0.232 | 0.145 |
| H37Rv_KO_CtpC | -0.092 | -1.127 |
| H37Rv_KO_CtpD | -0.017 | -0.489 |
| H37Rv_KO_Rv1272 | -1.579 | -3.25 |
| H37Rv_KO_SugABC | -0.578 | -2.038 |
| H37Rv_KO_MbtN | -0.208 | -1.402 |
| Trans05 | -0.86 | -0.194 |
| macrophage_unactivated | -0.852 | -1.553 |
| IL1 | -0.291 | -2.106 |
| Rapamycin | -0.316 | -0.807 |
| Tcell | -0.472 | -1.603 |
| GMCSF | -0.372 | -0.264 |
| IFNab | -0.961 | -1.034 |
| IFNg | -0.299 | -0.406 |
| IFNg_GMCSF1 | -0.562 | -0.207 |
| Rv1432_day32 | -0.627 | 0.0 |
| Rv1565c_day32 | 0.142 | 0.0 |
| secA2_input | 0.49 | -0.307 |
| delta_Rv3594 | 0.182 | -0.765 |
| delta_Rv3717 | -0.287 | -1.1 |
| delta_Rv3811 | -0.158 | -0.431 |
| delta_Rv0954 | 0.769 | 0.434 |
| PonA1 | -0.663 | -0.419 |
| EccD1_KO | -0.082 | -0.835 |
| EspI_KO | -0.374 | -1.349 |
| PE35_KO | -0.423 | -1.135 |
| PPE68_KO | -0.397 | -0.525 |
| glycerol2 | -0.045 | 0.667 |
| lignocerate | 0.074 | -0.078 |
| oleate | 0.027 | 0.916 |
| phosphatidylcholine | 0.136 | 1.648 |
| acetate | -0.667 | 0.199 |
| glucAc | -0.431 | -1.242 |
| Rv0950ko | 0.501 | 0.314 |
| Rv1096ko | -0.296 | 0.983 |
| Rv3684ko | -0.167 | 0.534 |
| delta_otsA_trehalose | 1.731 | -0.071 |