Top 10 genes with highest correlation to Rv2860c/glnA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0959/- | (cc=0.6171) | info on Rv0959/- |
| Rv3062/ligB | (cc=0.5403) | info on Rv3062/ligB |
| Rv3655c/- | (cc=0.5328) | info on Rv3655c/- |
| Rv2484c/- | (cc=0.5218) | info on Rv2484c/- |
| Rv1180/pks3 | (cc=0.5176) | info on Rv1180/pks3 |
| Rv2236c/cobD | (cc=0.5173) | info on Rv2236c/cobD |
| Rv0569/- | (cc=0.5139) | info on Rv0569/- |
| Rv3371/- | (cc=0.5112) | info on Rv3371/- |
| Rv3652/PE_PGRS60 | (cc=0.4998) | info on Rv3652/PE_PGRS60 |
| Rv2915c/- | (cc=0.499) | info on Rv2915c/- |
Correlation of Rv2860c/glnA4 with Rv2915c/-
Normalized LFCs for Rv2860c/glnA4:
(description and provenance of datasets)
| Rv2860c/glnA4 | Rv2915c/- | |
| Fe_supp_jason_reseq | 0.272 | 0.384 |
| low_pH_jason_reseq | 0.348 | -0.564 |
| NO_jason_reseq | -0.163 | 0.612 |
| B6_jason_reseq | 1.016 | 0.963 |
| MHCII_jason_reseq | 1.38 | 1.18 |
| Isoniazid02 | 0.528 | -0.583 |
| Rifampicin4 | -0.206 | 0.447 |
| Ethambutol3 | 2.104 | -0.488 |
| Meropenem3 | 0.435 | 0.519 |
| Vancomycin16 | 0.443 | -0.255 |
| Rv2680_day32 | 0.795 | -0.528 |
| H37Rv_KO_MarP | -0.167 | 0.073 |
| hypoxia_3wks | -0.144 | 0.742 |
| hypoxia_6wks | -0.205 | 0.651 |
| glycerol | 0.878 | 0.138 |
| cholesterol | 0.406 | 0.216 |
| AJ | 0.457 | 0.709 |
| Bibs02 | -0.015 | -0.307 |
| Bibs02c | -0.033 | 0.365 |
| BL6 | -0.438 | -0.887 |
| BL6a | -0.29 | 0.059 |
| BXD01 | 0.13 | -0.79 |
| BXD010 | -0.299 | -0.556 |
| BXD011 | -0.01 | 0.133 |
| BXD03 | 0.183 | 0.092 |
| BXD04 | -0.216 | -0.386 |
| BXD05 | 0.309 | -0.014 |
| BXD06 | -0.124 | -0.305 |
| BXD07 | -0.057 | -0.828 |
| BXD08 | 0.152 | -0.185 |
| BXD09 | -0.299 | -0.375 |
| CAST | 0.279 | 0.24 |
| CCcont | -0.379 | -0.636 |
| DS01 | 1.027 | 0.52 |
| DS02 | 0.61 | 0.581 |
| DS04 | 0.904 | 0.356 |
| DS0c | 1.193 | 0.63 |
| GP01 | -0.906 | -1.518 |
| GP02 | 0.944 | -0.406 |
| GP0c | -0.984 | -1.971 |
| NOD | -0.308 | 0.099 |
| NZO | 0.535 | 0.144 |
| PWK | 0.689 | -0.05 |
| H37Rv_KO_CtpC | -0.804 | -0.644 |
| H37Rv_KO_CtpD | -1.941 | -1.357 |
| H37Rv_KO_Rv1272 | 0.109 | -0.287 |
| H37Rv_KO_SugABC | -0.325 | -0.264 |
| H37Rv_KO_MbtN | -0.907 | -1.728 |
| Trans05 | 0.292 | -0.481 |
| macrophage_unactivated | 0.679 | -0.578 |
| IL1 | 0.383 | 0.101 |
| Rapamycin | 0.147 | -0.681 |
| Tcell | -0.459 | -1.049 |
| GMCSF | 0.28 | -0.483 |
| IFNab | 0.036 | -0.846 |
| IFNg | -0.235 | -0.326 |
| IFNg_GMCSF1 | 0.151 | -0.154 |
| Rv1432_day32 | 0.738 | 0.562 |
| Rv1565c_day32 | -0.3 | 0.088 |
| secA2_input | 0.715 | 0.42 |
| delta_Rv3594 | 0.142 | -1.623 |
| delta_Rv3717 | 0.117 | -0.853 |
| delta_Rv3811 | -0.274 | -0.355 |
| delta_Rv0954 | -0.578 | -1.072 |
| PonA1 | 0.358 | -0.479 |
| EccD1_KO | 0.441 | 0.674 |
| EspI_KO | 0.168 | 1.352 |
| PE35_KO | 0.598 | 1.21 |
| PPE68_KO | 0.429 | 1.03 |
| glycerol2 | 0.158 | -0.151 |
| lignocerate | 0.138 | -0.574 |
| oleate | 0.73 | 0.349 |
| phosphatidylcholine | 0.556 | -0.021 |
| acetate | -0.1 | -0.331 |
| glucAc | -0.079 | -1.08 |
| Rv0950ko | 0.425 | -0.905 |
| Rv1096ko | 0.621 | -0.624 |
| Rv3684ko | 0.622 | -0.396 |
| delta_otsA_trehalose | 0.045 | -0.235 |