Top 10 genes with highest correlation to Rv2860c/glnA4:
update plot | correlation | link to info on gene |
---|---|---|
Rv0959/- | (cc=0.6171) | info on Rv0959/- |
Rv3062/ligB | (cc=0.5403) | info on Rv3062/ligB |
Rv3655c/- | (cc=0.5328) | info on Rv3655c/- |
Rv2484c/- | (cc=0.5218) | info on Rv2484c/- |
Rv1180/pks3 | (cc=0.5176) | info on Rv1180/pks3 |
Rv2236c/cobD | (cc=0.5173) | info on Rv2236c/cobD |
Rv0569/- | (cc=0.5139) | info on Rv0569/- |
Rv3371/- | (cc=0.5112) | info on Rv3371/- |
Rv3652/PE_PGRS60 | (cc=0.4998) | info on Rv3652/PE_PGRS60 |
Rv2915c/- | (cc=0.499) | info on Rv2915c/- |
Correlation of Rv2860c/glnA4 with Rv2236c/cobD
Normalized LFCs for Rv2860c/glnA4:
(description and provenance of datasets)
Rv2860c/glnA4 | Rv2236c/cobD | |
Fe_supp_jason_reseq | 0.272 | -0.369 |
low_pH_jason_reseq | 0.348 | 1.057 |
NO_jason_reseq | -0.163 | 0.845 |
B6_jason_reseq | 1.016 | 1.09 |
MHCII_jason_reseq | 1.38 | 0.977 |
Isoniazid02 | 0.528 | 0.304 |
Rifampicin4 | -0.206 | 1.438 |
Ethambutol3 | 2.104 | 0.384 |
Meropenem3 | 0.435 | 0.636 |
Vancomycin16 | 0.443 | 0.48 |
Rv2680_day32 | 0.795 | -0.359 |
H37Rv_KO_MarP | -0.167 | -0.128 |
hypoxia_3wks | -0.144 | -1.579 |
hypoxia_6wks | -0.205 | -1.748 |
glycerol | 0.878 | 0.532 |
cholesterol | 0.406 | 0.238 |
AJ | 0.457 | 0.425 |
Bibs02 | -0.015 | 0.352 |
Bibs02c | -0.033 | 0.759 |
BL6 | -0.438 | -0.852 |
BL6a | -0.29 | -0.67 |
BXD01 | 0.13 | -0.153 |
BXD010 | -0.299 | -0.986 |
BXD011 | -0.01 | -1.612 |
BXD03 | 0.183 | -0.732 |
BXD04 | -0.216 | -0.1 |
BXD05 | 0.309 | -1.516 |
BXD06 | -0.124 | -0.537 |
BXD07 | -0.057 | -0.857 |
BXD08 | 0.152 | -0.513 |
BXD09 | -0.299 | -1.369 |
CAST | 0.279 | -0.48 |
CCcont | -0.379 | -1.414 |
DS01 | 1.027 | 0.226 |
DS02 | 0.61 | 0.789 |
DS04 | 0.904 | 1.152 |
DS0c | 1.193 | -0.074 |
GP01 | -0.906 | -0.304 |
GP02 | 0.944 | 0.917 |
GP0c | -0.984 | -1.195 |
NOD | -0.308 | 0.049 |
NZO | 0.535 | 0.231 |
PWK | 0.689 | -0.463 |
H37Rv_KO_CtpC | -0.804 | -1.777 |
H37Rv_KO_CtpD | -1.941 | -1.753 |
H37Rv_KO_Rv1272 | 0.109 | -1.296 |
H37Rv_KO_SugABC | -0.325 | -1.183 |
H37Rv_KO_MbtN | -0.907 | -1.842 |
Trans05 | 0.292 | -0.976 |
macrophage_unactivated | 0.679 | 0.136 |
IL1 | 0.383 | -0.338 |
Rapamycin | 0.147 | -0.068 |
Tcell | -0.459 | -1.401 |
GMCSF | 0.28 | -0.766 |
IFNab | 0.036 | -0.345 |
IFNg | -0.235 | -1.31 |
IFNg_GMCSF1 | 0.151 | 0.396 |
Rv1432_day32 | 0.738 | 1.52 |
Rv1565c_day32 | -0.3 | 0.0 |
secA2_input | 0.715 | -0.944 |
delta_Rv3594 | 0.142 | 0.428 |
delta_Rv3717 | 0.117 | -0.357 |
delta_Rv3811 | -0.274 | 0.076 |
delta_Rv0954 | -0.578 | 0.159 |
PonA1 | 0.358 | 0.789 |
EccD1_KO | 0.441 | 0.559 |
EspI_KO | 0.168 | -1.489 |
PE35_KO | 0.598 | -0.922 |
PPE68_KO | 0.429 | -0.809 |
glycerol2 | 0.158 | -0.974 |
lignocerate | 0.138 | -0.406 |
oleate | 0.73 | -0.549 |
phosphatidylcholine | 0.556 | 0.115 |
acetate | -0.1 | -0.465 |
glucAc | -0.079 | 0.242 |
Rv0950ko | 0.425 | 0.286 |
Rv1096ko | 0.621 | 0.467 |
Rv3684ko | 0.622 | -0.219 |
delta_otsA_trehalose | 0.045 | 0.373 |