Top 10 genes with highest correlation to Rv2860c/glnA4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0959/- | (cc=0.6171) | info on Rv0959/- |
| Rv3062/ligB | (cc=0.5403) | info on Rv3062/ligB |
| Rv3655c/- | (cc=0.5328) | info on Rv3655c/- |
| Rv2484c/- | (cc=0.5218) | info on Rv2484c/- |
| Rv1180/pks3 | (cc=0.5176) | info on Rv1180/pks3 |
| Rv2236c/cobD | (cc=0.5173) | info on Rv2236c/cobD |
| Rv0569/- | (cc=0.5139) | info on Rv0569/- |
| Rv3371/- | (cc=0.5112) | info on Rv3371/- |
| Rv3652/PE_PGRS60 | (cc=0.4998) | info on Rv3652/PE_PGRS60 |
| Rv2915c/- | (cc=0.499) | info on Rv2915c/- |
Correlation of Rv2860c/glnA4 with Rv0569/-
Normalized LFCs for Rv2860c/glnA4:
(description and provenance of datasets)
| Rv2860c/glnA4 | Rv0569/- | |
| Fe_supp_jason_reseq | 0.272 | -1.485 |
| low_pH_jason_reseq | 0.348 | -0.716 |
| NO_jason_reseq | -0.163 | -0.252 |
| B6_jason_reseq | 1.016 | 1.587 |
| MHCII_jason_reseq | 1.38 | 1.691 |
| Isoniazid02 | 0.528 | -0.192 |
| Rifampicin4 | -0.206 | 0.154 |
| Ethambutol3 | 2.104 | 1.679 |
| Meropenem3 | 0.435 | -0.053 |
| Vancomycin16 | 0.443 | 0.528 |
| Rv2680_day32 | 0.795 | -0.348 |
| H37Rv_KO_MarP | -0.167 | -0.461 |
| hypoxia_3wks | -0.144 | -0.08 |
| hypoxia_6wks | -0.205 | -0.75 |
| glycerol | 0.878 | -0.43 |
| cholesterol | 0.406 | -0.452 |
| AJ | 0.457 | -0.294 |
| Bibs02 | -0.015 | 0.691 |
| Bibs02c | -0.033 | -1.079 |
| BL6 | -0.438 | -0.127 |
| BL6a | -0.29 | -1.181 |
| BXD01 | 0.13 | -0.636 |
| BXD010 | -0.299 | -1.186 |
| BXD011 | -0.01 | -1.267 |
| BXD03 | 0.183 | -1.296 |
| BXD04 | -0.216 | 0.528 |
| BXD05 | 0.309 | -1.498 |
| BXD06 | -0.124 | -1.592 |
| BXD07 | -0.057 | -1.04 |
| BXD08 | 0.152 | -1.694 |
| BXD09 | -0.299 | -1.476 |
| CAST | 0.279 | -0.506 |
| CCcont | -0.379 | -1.548 |
| DS01 | 1.027 | 0.373 |
| DS02 | 0.61 | 0.165 |
| DS04 | 0.904 | -0.202 |
| DS0c | 1.193 | 0.178 |
| GP01 | -0.906 | 0.776 |
| GP02 | 0.944 | 1.362 |
| GP0c | -0.984 | -0.815 |
| NOD | -0.308 | 0.171 |
| NZO | 0.535 | -0.686 |
| PWK | 0.689 | -0.361 |
| H37Rv_KO_CtpC | -0.804 | -1.599 |
| H37Rv_KO_CtpD | -1.941 | -1.699 |
| H37Rv_KO_Rv1272 | 0.109 | -1.84 |
| H37Rv_KO_SugABC | -0.325 | -2.259 |
| H37Rv_KO_MbtN | -0.907 | -2.547 |
| Trans05 | 0.292 | -1.505 |
| macrophage_unactivated | 0.679 | -0.148 |
| IL1 | 0.383 | -0.178 |
| Rapamycin | 0.147 | -1.356 |
| Tcell | -0.459 | -0.544 |
| GMCSF | 0.28 | -0.618 |
| IFNab | 0.036 | -0.142 |
| IFNg | -0.235 | -0.216 |
| IFNg_GMCSF1 | 0.151 | -1.373 |
| Rv1432_day32 | 0.738 | -0.508 |
| Rv1565c_day32 | -0.3 | 0.199 |
| secA2_input | 0.715 | 0.805 |
| delta_Rv3594 | 0.142 | -0.184 |
| delta_Rv3717 | 0.117 | 0.297 |
| delta_Rv3811 | -0.274 | 0.593 |
| delta_Rv0954 | -0.578 | -0.518 |
| PonA1 | 0.358 | 0.128 |
| EccD1_KO | 0.441 | 0.428 |
| EspI_KO | 0.168 | 0.459 |
| PE35_KO | 0.598 | -0.099 |
| PPE68_KO | 0.429 | -0.205 |
| glycerol2 | 0.158 | 1.08 |
| lignocerate | 0.138 | -0.408 |
| oleate | 0.73 | 1.253 |
| phosphatidylcholine | 0.556 | 0.255 |
| acetate | -0.1 | -0.49 |
| glucAc | -0.079 | -1.225 |
| Rv0950ko | 0.425 | 0.0 |
| Rv1096ko | 0.621 | 0.452 |
| Rv3684ko | 0.622 | 0.131 |
| delta_otsA_trehalose | 0.045 | 1.266 |