Top 10 genes with highest correlation to Rv2805/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0521/- | (cc=0.4595) | info on Rv0521/- |
| Rv2657c/- | (cc=0.3982) | info on Rv2657c/- |
| Rv2317/uspB | (cc=0.3904) | info on Rv2317/uspB |
| Rv2055c/rpsR2 | (cc=0.3859) | info on Rv2055c/rpsR2 |
| Rv0899/ompA | (cc=0.3855) | info on Rv0899/ompA |
| Rv2804c/- | (cc=0.3846) | info on Rv2804c/- |
| Rv0319/pcp | (cc=0.3836) | info on Rv0319/pcp |
| Rv0616c/- | (cc=0.3718) | info on Rv0616c/- |
| Rv2212/- | (cc=0.3709) | info on Rv2212/- |
| Rv2046/lppI | (cc=0.366) | info on Rv2046/lppI |
Correlation of Rv2805/- with Rv2657c/-
Normalized LFCs for Rv2805/-:
(description and provenance of datasets)
| Rv2805/- | Rv2657c/- | |
| Fe_supp_jason_reseq | -0.491 | -2.325 |
| low_pH_jason_reseq | 0.679 | 0.952 |
| NO_jason_reseq | 1.04 | 0.158 |
| B6_jason_reseq | -0.088 | -1.935 |
| MHCII_jason_reseq | -1.231 | 0.311 |
| Isoniazid02 | 0.125 | 0.146 |
| Rifampicin4 | 1.592 | 0.921 |
| Ethambutol3 | 0.432 | 0.837 |
| Meropenem3 | 0.689 | 0.085 |
| Vancomycin16 | 0.154 | 0.215 |
| Rv2680_day32 | 1.172 | -1.395 |
| H37Rv_KO_MarP | 0.198 | 0.339 |
| hypoxia_3wks | -1.176 | -0.594 |
| hypoxia_6wks | -0.284 | 1.608 |
| glycerol | 0.455 | 0.304 |
| cholesterol | 0.477 | 0.346 |
| AJ | -0.245 | 0.694 |
| Bibs02 | -0.58 | -1.79 |
| Bibs02c | -0.925 | -1.867 |
| BL6 | 1.296 | -1.181 |
| BL6a | -0.742 | -2.088 |
| BXD01 | -0.471 | -1.591 |
| BXD010 | 0.945 | -2.092 |
| BXD011 | -0.122 | -0.905 |
| BXD03 | -0.506 | -2.829 |
| BXD04 | 0.022 | -0.559 |
| BXD05 | -0.226 | -1.989 |
| BXD06 | -0.527 | -2.273 |
| BXD07 | -0.051 | -2.128 |
| BXD08 | 1.251 | -0.631 |
| BXD09 | -0.42 | -1.922 |
| CAST | -0.412 | 0.262 |
| CCcont | -0.333 | -0.408 |
| DS01 | -0.133 | 0.313 |
| DS02 | 0.717 | 0.288 |
| DS04 | 1.176 | -0.014 |
| DS0c | -1.318 | -1.078 |
| GP01 | -0.998 | -1.459 |
| GP02 | -0.67 | -0.8 |
| GP0c | 0.442 | -0.676 |
| NOD | 1.733 | 0.298 |
| NZO | -0.585 | 0.699 |
| PWK | 0.26 | -0.33 |
| H37Rv_KO_CtpC | 2.482 | 0.012 |
| H37Rv_KO_CtpD | -2.69 | -0.519 |
| H37Rv_KO_Rv1272 | -1.281 | -0.061 |
| H37Rv_KO_SugABC | 0.638 | -1.618 |
| H37Rv_KO_MbtN | 0.042 | 0.291 |
| Trans05 | 0.637 | 0.438 |
| macrophage_unactivated | -0.477 | -0.622 |
| IL1 | -1.225 | -3.275 |
| Rapamycin | -0.203 | -2.142 |
| Tcell | -0.57 | -0.834 |
| GMCSF | 1.167 | -0.623 |
| IFNab | -0.807 | -1.357 |
| IFNg | -1.232 | -2.413 |
| IFNg_GMCSF1 | 0.22 | -0.87 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -1.109 | -2.316 |
| secA2_input | 0.122 | 0.0 |
| delta_Rv3594 | 1.19 | 0.818 |
| delta_Rv3717 | 1.167 | 1.414 |
| delta_Rv3811 | 0.4 | 2.207 |
| delta_Rv0954 | 1.824 | 0.649 |
| PonA1 | 2.412 | 0.789 |
| EccD1_KO | 0.0 | -0.194 |
| EspI_KO | 1.012 | -0.168 |
| PE35_KO | -0.038 | 0.796 |
| PPE68_KO | -0.211 | 1.606 |
| glycerol2 | 0.289 | 2.168 |
| lignocerate | 0.793 | 3.225 |
| oleate | -0.899 | -1.759 |
| phosphatidylcholine | 0.807 | 2.37 |
| acetate | -0.015 | 3.182 |
| glucAc | 1.02 | 2.583 |
| Rv0950ko | 0.308 | 0.127 |
| Rv1096ko | -1.221 | -1.158 |
| Rv3684ko | -0.92 | 0.881 |
| delta_otsA_trehalose | -0.122 | -1.701 |