Top 10 genes with highest correlation to Rv2805/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0521/- | (cc=0.4595) | info on Rv0521/- |
| Rv2657c/- | (cc=0.3982) | info on Rv2657c/- |
| Rv2317/uspB | (cc=0.3904) | info on Rv2317/uspB |
| Rv2055c/rpsR2 | (cc=0.3859) | info on Rv2055c/rpsR2 |
| Rv0899/ompA | (cc=0.3855) | info on Rv0899/ompA |
| Rv2804c/- | (cc=0.3846) | info on Rv2804c/- |
| Rv0319/pcp | (cc=0.3836) | info on Rv0319/pcp |
| Rv0616c/- | (cc=0.3718) | info on Rv0616c/- |
| Rv2212/- | (cc=0.3709) | info on Rv2212/- |
| Rv2046/lppI | (cc=0.366) | info on Rv2046/lppI |
Correlation of Rv2805/- with Rv0616c/-
Normalized LFCs for Rv2805/-:
(description and provenance of datasets)
| Rv2805/- | Rv0616c/- | |
| Fe_supp_jason_reseq | -0.491 | 0.182 |
| low_pH_jason_reseq | 0.679 | 0.343 |
| NO_jason_reseq | 1.04 | -0.507 |
| B6_jason_reseq | -0.088 | -0.374 |
| MHCII_jason_reseq | -1.231 | 1.502 |
| Isoniazid02 | 0.125 | 0.231 |
| Rifampicin4 | 1.592 | 0.458 |
| Ethambutol3 | 0.432 | -0.671 |
| Meropenem3 | 0.689 | -0.276 |
| Vancomycin16 | 0.154 | 0.202 |
| Rv2680_day32 | 1.172 | -0.301 |
| H37Rv_KO_MarP | 0.198 | 0.418 |
| hypoxia_3wks | -1.176 | -2.018 |
| hypoxia_6wks | -0.284 | -1.094 |
| glycerol | 0.455 | 0.626 |
| cholesterol | 0.477 | -0.336 |
| AJ | -0.245 | -0.703 |
| Bibs02 | -0.58 | -1.762 |
| Bibs02c | -0.925 | 1.391 |
| BL6 | 1.296 | 1.432 |
| BL6a | -0.742 | -0.6 |
| BXD01 | -0.471 | -1.151 |
| BXD010 | 0.945 | 0.715 |
| BXD011 | -0.122 | -0.395 |
| BXD03 | -0.506 | -1.923 |
| BXD04 | 0.022 | -1.125 |
| BXD05 | -0.226 | -0.18 |
| BXD06 | -0.527 | -2.017 |
| BXD07 | -0.051 | -1.224 |
| BXD08 | 1.251 | -1.031 |
| BXD09 | -0.42 | -1.538 |
| CAST | -0.412 | 1.637 |
| CCcont | -0.333 | -1.3 |
| DS01 | -0.133 | -1.252 |
| DS02 | 0.717 | 0.736 |
| DS04 | 1.176 | -0.704 |
| DS0c | -1.318 | 0.592 |
| GP01 | -0.998 | -2.098 |
| GP02 | -0.67 | 0.501 |
| GP0c | 0.442 | -1.038 |
| NOD | 1.733 | 0.426 |
| NZO | -0.585 | -0.331 |
| PWK | 0.26 | -0.496 |
| H37Rv_KO_CtpC | 2.482 | 0.247 |
| H37Rv_KO_CtpD | -2.69 | -3.202 |
| H37Rv_KO_Rv1272 | -1.281 | -2.83 |
| H37Rv_KO_SugABC | 0.638 | -2.285 |
| H37Rv_KO_MbtN | 0.042 | -1.248 |
| Trans05 | 0.637 | -0.444 |
| macrophage_unactivated | -0.477 | -0.811 |
| IL1 | -1.225 | -1.32 |
| Rapamycin | -0.203 | -1.05 |
| Tcell | -0.57 | -0.916 |
| GMCSF | 1.167 | -1.001 |
| IFNab | -0.807 | -2.044 |
| IFNg | -1.232 | -0.687 |
| IFNg_GMCSF1 | 0.22 | -1.273 |
| Rv1432_day32 | 0.0 | 0.137 |
| Rv1565c_day32 | -1.109 | 0.276 |
| secA2_input | 0.122 | -1.1 |
| delta_Rv3594 | 1.19 | -0.26 |
| delta_Rv3717 | 1.167 | 1.221 |
| delta_Rv3811 | 0.4 | 1.132 |
| delta_Rv0954 | 1.824 | -0.191 |
| PonA1 | 2.412 | 1.97 |
| EccD1_KO | 0.0 | 0.483 |
| EspI_KO | 1.012 | -0.918 |
| PE35_KO | -0.038 | -1.374 |
| PPE68_KO | -0.211 | -0.989 |
| glycerol2 | 0.289 | -1.297 |
| lignocerate | 0.793 | 0.482 |
| oleate | -0.899 | -1.117 |
| phosphatidylcholine | 0.807 | -0.618 |
| acetate | -0.015 | 1.014 |
| glucAc | 1.02 | 1.319 |
| Rv0950ko | 0.308 | 0.28 |
| Rv1096ko | -1.221 | 0.32 |
| Rv3684ko | -0.92 | -0.327 |
| delta_otsA_trehalose | -0.122 | 2.626 |