Top 10 genes with highest correlation to Rv2798c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2697c/dut | (cc=0.425) | info on Rv2697c/dut |
| Rv2164c/- | (cc=0.4063) | info on Rv2164c/- |
| Rv0421c/- | (cc=0.3914) | info on Rv0421c/- |
| Rv3086/adhD | (cc=0.3798) | info on Rv3086/adhD |
| Rv1341/- | (cc=0.3735) | info on Rv1341/- |
| Rv1049/- | (cc=0.3714) | info on Rv1049/- |
| Rv3807c/- | (cc=0.3687) | info on Rv3807c/- |
| Rv0841/- | (cc=0.3674) | info on Rv0841/- |
| Rv0105c/rpmB1 | (cc=0.3624) | info on Rv0105c/rpmB1 |
| Rv3002c/ilvN | (cc=0.3438) | info on Rv3002c/ilvN |
Correlation of Rv2798c/- with Rv3086/adhD
Normalized LFCs for Rv2798c/-:
(description and provenance of datasets)
| Rv2798c/- | Rv3086/adhD | |
| Fe_supp_jason_reseq | 2.167 | -0.21 |
| low_pH_jason_reseq | -0.432 | 0.146 |
| NO_jason_reseq | 2.058 | 0.173 |
| B6_jason_reseq | 1.408 | 0.47 |
| MHCII_jason_reseq | 0.4 | 0.631 |
| Isoniazid02 | -0.285 | -1.477 |
| Rifampicin4 | 1.348 | 0.455 |
| Ethambutol3 | -0.028 | -1.22 |
| Meropenem3 | 0.558 | -0.954 |
| Vancomycin16 | 0.963 | -0.692 |
| Rv2680_day32 | 0.0 | 0.141 |
| H37Rv_KO_MarP | -0.357 | -0.059 |
| hypoxia_3wks | 1.228 | -0.53 |
| hypoxia_6wks | 1.086 | -0.031 |
| glycerol | -0.847 | -1.015 |
| cholesterol | -0.281 | -0.408 |
| AJ | 0.272 | 0.175 |
| Bibs02 | 1.631 | 0.938 |
| Bibs02c | -2.922 | -0.406 |
| BL6 | 0.214 | 0.748 |
| BL6a | 0.069 | -0.759 |
| BXD01 | -0.339 | -0.515 |
| BXD010 | 0.803 | 0.077 |
| BXD011 | -0.658 | -0.247 |
| BXD03 | 0.059 | -0.316 |
| BXD04 | 0.174 | -0.375 |
| BXD05 | -0.036 | -0.379 |
| BXD06 | -0.024 | -0.312 |
| BXD07 | 0.44 | -0.331 |
| BXD08 | 1.038 | 0.208 |
| BXD09 | 0.986 | 0.174 |
| CAST | 0.04 | 0.093 |
| CCcont | 0.289 | 0.153 |
| DS01 | -0.696 | -0.089 |
| DS02 | 0.677 | 0.386 |
| DS04 | 1.389 | 0.417 |
| DS0c | -0.352 | 1.219 |
| GP01 | 1.719 | -0.637 |
| GP02 | -0.255 | 0.382 |
| GP0c | 0.536 | -0.395 |
| NOD | -0.688 | -0.264 |
| NZO | -0.345 | 0.065 |
| PWK | -0.239 | -0.351 |
| H37Rv_KO_CtpC | -1.563 | -1.177 |
| H37Rv_KO_CtpD | 1.476 | 0.425 |
| H37Rv_KO_Rv1272 | -1.67 | -0.54 |
| H37Rv_KO_SugABC | -1.258 | -1.133 |
| H37Rv_KO_MbtN | -1.221 | -1.373 |
| Trans05 | -2.817 | -0.411 |
| macrophage_unactivated | 0.786 | 0.038 |
| IL1 | 0.024 | -0.451 |
| Rapamycin | -0.614 | 0.037 |
| Tcell | -0.88 | -0.039 |
| GMCSF | -1.555 | 0.533 |
| IFNab | 0.463 | -0.32 |
| IFNg | -1.155 | 0.203 |
| IFNg_GMCSF1 | 1.505 | 0.698 |
| Rv1432_day32 | 0.0 | 0.327 |
| Rv1565c_day32 | 0.0 | -0.15 |
| secA2_input | -1.533 | -0.465 |
| delta_Rv3594 | 2.097 | 1.862 |
| delta_Rv3717 | 1.124 | 1.436 |
| delta_Rv3811 | 2.167 | 0.895 |
| delta_Rv0954 | -1.799 | 1.454 |
| PonA1 | 0.958 | 0.628 |
| EccD1_KO | 1.023 | 0.204 |
| EspI_KO | -2.424 | -0.95 |
| PE35_KO | -1.324 | 0.204 |
| PPE68_KO | -1.097 | -0.819 |
| glycerol2 | -0.503 | 0.726 |
| lignocerate | 0.49 | 1.153 |
| oleate | -0.737 | -0.335 |
| phosphatidylcholine | 0.091 | 0.901 |
| acetate | -0.045 | 0.685 |
| glucAc | 0.812 | 1.107 |
| Rv0950ko | 0.691 | 0.416 |
| Rv1096ko | -0.995 | 0.522 |
| Rv3684ko | -0.206 | 0.511 |
| delta_otsA_trehalose | 1.686 | 0.772 |