Top 10 genes with highest correlation to Rv2798c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2697c/dut | (cc=0.425) | info on Rv2697c/dut |
| Rv2164c/- | (cc=0.4063) | info on Rv2164c/- |
| Rv0421c/- | (cc=0.3914) | info on Rv0421c/- |
| Rv3086/adhD | (cc=0.3798) | info on Rv3086/adhD |
| Rv1341/- | (cc=0.3735) | info on Rv1341/- |
| Rv1049/- | (cc=0.3714) | info on Rv1049/- |
| Rv3807c/- | (cc=0.3687) | info on Rv3807c/- |
| Rv0841/- | (cc=0.3674) | info on Rv0841/- |
| Rv0105c/rpmB1 | (cc=0.3624) | info on Rv0105c/rpmB1 |
| Rv3002c/ilvN | (cc=0.3438) | info on Rv3002c/ilvN |
Correlation of Rv2798c/- with Rv0105c/rpmB1
Normalized LFCs for Rv2798c/-:
(description and provenance of datasets)
| Rv2798c/- | Rv0105c/rpmB1 | |
| Fe_supp_jason_reseq | 2.167 | 1.782 |
| low_pH_jason_reseq | -0.432 | 0.795 |
| NO_jason_reseq | 2.058 | -1.567 |
| B6_jason_reseq | 1.408 | 1.567 |
| MHCII_jason_reseq | 0.4 | 1.649 |
| Isoniazid02 | -0.285 | 0.147 |
| Rifampicin4 | 1.348 | 0.896 |
| Ethambutol3 | -0.028 | -0.478 |
| Meropenem3 | 0.558 | 0.503 |
| Vancomycin16 | 0.963 | 1.133 |
| Rv2680_day32 | 0.0 | -0.17 |
| H37Rv_KO_MarP | -0.357 | -0.048 |
| hypoxia_3wks | 1.228 | 0.558 |
| hypoxia_6wks | 1.086 | -0.324 |
| glycerol | -0.847 | -0.408 |
| cholesterol | -0.281 | 0.656 |
| AJ | 0.272 | -1.385 |
| Bibs02 | 1.631 | 1.968 |
| Bibs02c | -2.922 | -0.591 |
| BL6 | 0.214 | 0.585 |
| BL6a | 0.069 | -0.343 |
| BXD01 | -0.339 | 0.432 |
| BXD010 | 0.803 | -0.839 |
| BXD011 | -0.658 | 0.4 |
| BXD03 | 0.059 | 0.376 |
| BXD04 | 0.174 | 0.048 |
| BXD05 | -0.036 | -0.352 |
| BXD06 | -0.024 | -0.62 |
| BXD07 | 0.44 | -0.465 |
| BXD08 | 1.038 | 0.072 |
| BXD09 | 0.986 | -0.584 |
| CAST | 0.04 | 0.669 |
| CCcont | 0.289 | -0.712 |
| DS01 | -0.696 | -1.068 |
| DS02 | 0.677 | 0.44 |
| DS04 | 1.389 | -0.318 |
| DS0c | -0.352 | -1.486 |
| GP01 | 1.719 | 3.076 |
| GP02 | -0.255 | 0.206 |
| GP0c | 0.536 | 1.264 |
| NOD | -0.688 | -0.347 |
| NZO | -0.345 | -0.647 |
| PWK | -0.239 | 0.136 |
| H37Rv_KO_CtpC | -1.563 | 0.956 |
| H37Rv_KO_CtpD | 1.476 | 1.399 |
| H37Rv_KO_Rv1272 | -1.67 | 0.375 |
| H37Rv_KO_SugABC | -1.258 | -2.054 |
| H37Rv_KO_MbtN | -1.221 | -0.441 |
| Trans05 | -2.817 | -0.239 |
| macrophage_unactivated | 0.786 | 1.114 |
| IL1 | 0.024 | -1.388 |
| Rapamycin | -0.614 | -0.178 |
| Tcell | -0.88 | 0.57 |
| GMCSF | -1.555 | 0.0 |
| IFNab | 0.463 | 0.169 |
| IFNg | -1.155 | 0.037 |
| IFNg_GMCSF1 | 1.505 | 1.282 |
| Rv1432_day32 | 0.0 | -0.094 |
| Rv1565c_day32 | 0.0 | -0.706 |
| secA2_input | -1.533 | -0.869 |
| delta_Rv3594 | 2.097 | -0.422 |
| delta_Rv3717 | 1.124 | 1.354 |
| delta_Rv3811 | 2.167 | 1.89 |
| delta_Rv0954 | -1.799 | 1.708 |
| PonA1 | 0.958 | -0.074 |
| EccD1_KO | 1.023 | -0.109 |
| EspI_KO | -2.424 | -0.191 |
| PE35_KO | -1.324 | -0.995 |
| PPE68_KO | -1.097 | -0.474 |
| glycerol2 | -0.503 | 0.86 |
| lignocerate | 0.49 | 0.155 |
| oleate | -0.737 | 0.38 |
| phosphatidylcholine | 0.091 | 0.539 |
| acetate | -0.045 | -0.126 |
| glucAc | 0.812 | 0.277 |
| Rv0950ko | 0.691 | 0.446 |
| Rv1096ko | -0.995 | 0.654 |
| Rv3684ko | -0.206 | 0.891 |
| delta_otsA_trehalose | 1.686 | 2.478 |