Top 10 genes with highest correlation to Rv2759c/vapC42:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5105) | info on Rv0233/nrdB |
| Rv1864c/- | (cc=0.4818) | info on Rv1864c/- |
| Rv3309c/upp | (cc=0.4679) | info on Rv3309c/upp |
| Rv2306A/- | (cc=0.4662) | info on Rv2306A/- |
| Rv3504/fadE26 | (cc=0.4647) | info on Rv3504/fadE26 |
| Rv2489c/- | (cc=0.4554) | info on Rv2489c/- |
| Rv0271c/fadE6 | (cc=0.4397) | info on Rv0271c/fadE6 |
| Rv3770c/- | (cc=0.4386) | info on Rv3770c/- |
| Rv3740c/- | (cc=0.4382) | info on Rv3740c/- |
| Rv0359/- | (cc=0.4337) | info on Rv0359/- |
Correlation of Rv2759c/vapC42 with Rv3740c/-
Normalized LFCs for Rv2759c/vapC42:
(description and provenance of datasets)
| Rv2759c/vapC42 | Rv3740c/- | |
| Fe_supp_jason_reseq | 0.923 | 0.145 |
| low_pH_jason_reseq | -1.611 | -0.674 |
| NO_jason_reseq | 0.533 | -0.06 |
| B6_jason_reseq | 0.47 | -0.578 |
| MHCII_jason_reseq | 1.11 | -0.239 |
| Isoniazid02 | -0.335 | -0.576 |
| Rifampicin4 | -0.328 | -0.219 |
| Ethambutol3 | -0.322 | -0.366 |
| Meropenem3 | -0.083 | -0.54 |
| Vancomycin16 | 0.127 | -0.39 |
| Rv2680_day32 | -0.107 | 0.536 |
| H37Rv_KO_MarP | 1.168 | 0.538 |
| hypoxia_3wks | 0.594 | -0.199 |
| hypoxia_6wks | 0.489 | -0.618 |
| glycerol | -0.26 | -0.057 |
| cholesterol | 0.079 | -0.061 |
| AJ | 0.035 | -0.192 |
| Bibs02 | 1.18 | 0.11 |
| Bibs02c | 0.083 | 0.036 |
| BL6 | 0.413 | -0.146 |
| BL6a | 0.28 | -0.293 |
| BXD01 | -0.3 | -0.229 |
| BXD010 | -0.202 | -0.38 |
| BXD011 | -0.186 | 0.085 |
| BXD03 | -0.594 | -0.552 |
| BXD04 | -0.325 | -0.499 |
| BXD05 | 0.63 | 0.439 |
| BXD06 | 0.046 | -0.115 |
| BXD07 | 0.653 | -0.114 |
| BXD08 | 0.328 | -0.105 |
| BXD09 | 0.069 | 0.014 |
| CAST | -0.696 | -0.964 |
| CCcont | -0.556 | -0.14 |
| DS01 | 1.044 | 0.291 |
| DS02 | 1.276 | 0.49 |
| DS04 | 1.449 | 0.908 |
| DS0c | 2.003 | 0.465 |
| GP01 | 0.559 | 0.547 |
| GP02 | -0.24 | 1.436 |
| GP0c | 0.99 | -0.316 |
| NOD | 0.879 | -0.626 |
| NZO | 0.308 | 0.04 |
| PWK | -0.155 | -0.443 |
| H37Rv_KO_CtpC | -0.751 | -0.417 |
| H37Rv_KO_CtpD | -0.636 | -0.162 |
| H37Rv_KO_Rv1272 | -0.096 | 0.491 |
| H37Rv_KO_SugABC | -0.122 | 0.25 |
| H37Rv_KO_MbtN | 0.132 | 0.212 |
| Trans05 | 0.162 | 0.352 |
| macrophage_unactivated | -1.073 | -0.218 |
| IL1 | -0.952 | -0.466 |
| Rapamycin | 0.249 | -0.482 |
| Tcell | -0.877 | -0.743 |
| GMCSF | 0.174 | -0.158 |
| IFNab | 0.139 | 0.121 |
| IFNg | 0.123 | -0.147 |
| IFNg_GMCSF1 | -0.031 | 0.167 |
| Rv1432_day32 | 0.548 | 0.203 |
| Rv1565c_day32 | 0.095 | 0.024 |
| secA2_input | 0.346 | 0.124 |
| delta_Rv3594 | 0.355 | -0.404 |
| delta_Rv3717 | 0.137 | -0.339 |
| delta_Rv3811 | 0.659 | -0.013 |
| delta_Rv0954 | -0.543 | 0.417 |
| PonA1 | 0.037 | -0.215 |
| EccD1_KO | 0.648 | 0.362 |
| EspI_KO | 0.22 | -0.391 |
| PE35_KO | -0.096 | -0.359 |
| PPE68_KO | 0.227 | -0.381 |
| glycerol2 | -0.395 | 0.384 |
| lignocerate | -0.354 | 0.1 |
| oleate | 0.7 | 0.544 |
| phosphatidylcholine | 0.095 | 0.197 |
| acetate | -0.469 | -0.231 |
| glucAc | -1.168 | -0.365 |
| Rv0950ko | 0.492 | 0.154 |
| Rv1096ko | 1.2 | 0.317 |
| Rv3684ko | 1.208 | 0.888 |
| delta_otsA_trehalose | 0.45 | -0.356 |