Top 10 genes with highest correlation to Rv2759c/vapC42:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.5105) | info on Rv0233/nrdB |
| Rv1864c/- | (cc=0.4818) | info on Rv1864c/- |
| Rv3309c/upp | (cc=0.4679) | info on Rv3309c/upp |
| Rv2306A/- | (cc=0.4662) | info on Rv2306A/- |
| Rv3504/fadE26 | (cc=0.4647) | info on Rv3504/fadE26 |
| Rv2489c/- | (cc=0.4554) | info on Rv2489c/- |
| Rv0271c/fadE6 | (cc=0.4397) | info on Rv0271c/fadE6 |
| Rv3770c/- | (cc=0.4386) | info on Rv3770c/- |
| Rv3740c/- | (cc=0.4382) | info on Rv3740c/- |
| Rv0359/- | (cc=0.4337) | info on Rv0359/- |
Correlation of Rv2759c/vapC42 with Rv2306A/-
Normalized LFCs for Rv2759c/vapC42:
(description and provenance of datasets)
| Rv2759c/vapC42 | Rv2306A/- | |
| Fe_supp_jason_reseq | 0.923 | 0.137 |
| low_pH_jason_reseq | -1.611 | -0.84 |
| NO_jason_reseq | 0.533 | -0.181 |
| B6_jason_reseq | 0.47 | 0.072 |
| MHCII_jason_reseq | 1.11 | 0.82 |
| Isoniazid02 | -0.335 | -2.04 |
| Rifampicin4 | -0.328 | 0.704 |
| Ethambutol3 | -0.322 | -0.251 |
| Meropenem3 | -0.083 | -2.001 |
| Vancomycin16 | 0.127 | -0.775 |
| Rv2680_day32 | -0.107 | -0.251 |
| H37Rv_KO_MarP | 1.168 | -0.167 |
| hypoxia_3wks | 0.594 | 0.116 |
| hypoxia_6wks | 0.489 | 0.238 |
| glycerol | -0.26 | 0.648 |
| cholesterol | 0.079 | -0.308 |
| AJ | 0.035 | -0.35 |
| Bibs02 | 1.18 | 0.351 |
| Bibs02c | 0.083 | 0.044 |
| BL6 | 0.413 | -0.773 |
| BL6a | 0.28 | -1.02 |
| BXD01 | -0.3 | -1.194 |
| BXD010 | -0.202 | -1.663 |
| BXD011 | -0.186 | -1.074 |
| BXD03 | -0.594 | -0.844 |
| BXD04 | -0.325 | -1.122 |
| BXD05 | 0.63 | -1.427 |
| BXD06 | 0.046 | -0.841 |
| BXD07 | 0.653 | -0.984 |
| BXD08 | 0.328 | -0.991 |
| BXD09 | 0.069 | -1.11 |
| CAST | -0.696 | -0.442 |
| CCcont | -0.556 | -1.093 |
| DS01 | 1.044 | 0.77 |
| DS02 | 1.276 | 0.405 |
| DS04 | 1.449 | 0.902 |
| DS0c | 2.003 | 0.442 |
| GP01 | 0.559 | 0.402 |
| GP02 | -0.24 | 0.034 |
| GP0c | 0.99 | 0.234 |
| NOD | 0.879 | -0.722 |
| NZO | 0.308 | -0.16 |
| PWK | -0.155 | 0.466 |
| H37Rv_KO_CtpC | -0.751 | -0.66 |
| H37Rv_KO_CtpD | -0.636 | -1.238 |
| H37Rv_KO_Rv1272 | -0.096 | -0.907 |
| H37Rv_KO_SugABC | -0.122 | -0.789 |
| H37Rv_KO_MbtN | 0.132 | -0.611 |
| Trans05 | 0.162 | -0.427 |
| macrophage_unactivated | -1.073 | -0.382 |
| IL1 | -0.952 | -1.261 |
| Rapamycin | 0.249 | -0.672 |
| Tcell | -0.877 | -1.3 |
| GMCSF | 0.174 | -0.607 |
| IFNab | 0.139 | -0.837 |
| IFNg | 0.123 | -0.676 |
| IFNg_GMCSF1 | -0.031 | -0.795 |
| Rv1432_day32 | 0.548 | 0.379 |
| Rv1565c_day32 | 0.095 | -0.526 |
| secA2_input | 0.346 | -0.57 |
| delta_Rv3594 | 0.355 | -0.323 |
| delta_Rv3717 | 0.137 | -0.369 |
| delta_Rv3811 | 0.659 | 0.076 |
| delta_Rv0954 | -0.543 | -0.665 |
| PonA1 | 0.037 | -0.989 |
| EccD1_KO | 0.648 | 0.954 |
| EspI_KO | 0.22 | 0.955 |
| PE35_KO | -0.096 | 0.767 |
| PPE68_KO | 0.227 | 0.554 |
| glycerol2 | -0.395 | -0.059 |
| lignocerate | -0.354 | -0.201 |
| oleate | 0.7 | 0.717 |
| phosphatidylcholine | 0.095 | 0.196 |
| acetate | -0.469 | 0.04 |
| glucAc | -1.168 | -0.351 |
| Rv0950ko | 0.492 | 0.501 |
| Rv1096ko | 1.2 | -0.287 |
| Rv3684ko | 1.208 | 0.606 |
| delta_otsA_trehalose | 0.45 | 1.441 |